RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 NDUFB10O96000 172 aa24.17■■□□□ 1.46
SND1-214ENST00000489417 VEGFAP15692 232 aaPredicted RBP24.17■■□□□ 1.46
SND1-214ENST00000489417 SLC1A4P43007 532 aa24.17■■□□□ 1.46
SND1-214ENST00000489417 CCDC84Q86UT8 332 aaPredicted RBP24.17■■□□□ 1.46
SND1-214ENST00000489417 GMCL1Q96IK5 515 aa24.17■■□□□ 1.46
SND1-214ENST00000489417 GOPCQ9HD26 462 aa24.17■■□□□ 1.46
SND1-214ENST00000489417 GJB4Q9NTQ9 266 aa24.17■■□□□ 1.46
SND1-214ENST00000489417 FZD1Q9UP38 647 aa24.17■■□□□ 1.46
SND1-214ENST00000489417 UTRNP46939 3433 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 BAG4O95429 457 aaKnown RBP24.16■■□□□ 1.46
SND1-214ENST00000489417 RESTQ13127 1097 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 KRT40Q6A162 431 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 FERMT3Q86UX7 667 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 GLIS2Q9BZE0 524 aaPredicted RBP24.16■■□□□ 1.46
SND1-214ENST00000489417 UBA5Q9GZZ9 404 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 CPVLQ9H3G5 476 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 RRAGCQ9HB90 399 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 CLEC11AQ9Y240 323 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 ATP6V1DQ9Y5K8 247 aa24.16■■□□□ 1.46
SND1-214ENST00000489417 USP2O75604 605 aaPredicted RBP24.15■■□□□ 1.46
SND1-214ENST00000489417 NF2P35240 595 aa24.15■■□□□ 1.46
SND1-214ENST00000489417 PFKFB3Q16875 520 aaPredicted RBP24.15■■□□□ 1.46
SND1-214ENST00000489417 NOL9Q5SY16 702 aaKnown RBP24.15■■□□□ 1.46
SND1-214ENST00000489417 KCTD1Q719H9 257 aa24.15■■□□□ 1.46
SND1-214ENST00000489417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.15■■□□□ 1.463e-22■□□□□ 8.5
SND1-214ENST00000489417 PIBF1Q8WXW3 757 aa24.15■■□□□ 1.46
SND1-214ENST00000489417 ZKSCAN4Q969J2 545 aaPredicted RBP24.15■■□□□ 1.46
SND1-214ENST00000489417 PICK1Q9NRD5 415 aa24.15■■□□□ 1.46
SND1-214ENST00000489417 ISY1Q9ULR0 285 aaKnown RBP24.15■■□□□ 1.46
SND1-214ENST00000489417 MYH6P13533 1939 aa24.14■■□□□ 1.46
SND1-214ENST00000489417 SCG2P13521 617 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 XBP1P17861 261 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 PRKG1Q13976 671 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 NFKBIBQ15653 356 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 MCTP1Q6DN14 999 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 TTBK2Q6IQ55 1244 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 FEZ1Q99689 392 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 ZSCAN16Q9H4T2 348 aaPredicted RBP24.14■■□□□ 1.45
SND1-214ENST00000489417 RIOX1Q9H6W3 641 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 VCPKMTQ9H867 229 aa24.14■■□□□ 1.45
SND1-214ENST00000489417 PPP1R12BO60237 982 aaPredicted RBP24.13■■□□□ 1.45
SND1-214ENST00000489417 RRP36Q96EU6 259 aaKnown RBP24.13■■□□□ 1.45
SND1-214ENST00000489417 POTEIP0CG38 1075 aa24.12■■□□□ 1.45
SND1-214ENST00000489417 POTEJP0CG39 1038 aa24.12■■□□□ 1.45
SND1-214ENST00000489417 BMP3P12645 472 aa24.12■■□□□ 1.45
SND1-214ENST00000489417 PTPRAP18433 802 aa24.12■■□□□ 1.45
SND1-214ENST00000489417 AS3MTQ9HBK9 375 aa24.12■■□□□ 1.45
SND1-214ENST00000489417 VAT1LQ9HCJ6 419 aa24.12■■□□□ 1.45
SND1-214ENST00000489417 VPS54Q9P1Q0 977 aa24.12■■□□□ 1.45
SND1-214ENST00000489417 MCM4P33991 863 aa24.11■■□□□ 1.45
SND1-214ENST00000489417 MAP3K9P80192 1104 aa24.11■■□□□ 1.45
SND1-214ENST00000489417 ZYXQ15942 572 aaKnown RBP24.11■■□□□ 1.45
SND1-214ENST00000489417 FOXD4L6Q3SYB3 417 aaPredicted RBP24.11■■□□□ 1.45
SND1-214ENST00000489417 KIAA1755Q5JYT7 1200 aa24.11■■□□□ 1.45
SND1-214ENST00000489417 FOXD4L3Q6VB84 417 aaPredicted RBP24.11■■□□□ 1.45
SND1-214ENST00000489417 SPICE1Q8N0Z3 855 aa24.11■■□□□ 1.45
SND1-214ENST00000489417 NUP88Q99567 741 aaPredicted RBP24.11■■□□□ 1.45
SND1-214ENST00000489417 WDR18Q9BV38 432 aa24.11■■□□□ 1.45
SND1-214ENST00000489417 KIAA1683Q9H0B3 1180 aa24.11■■□□□ 1.45
SND1-214ENST00000489417 IREB2P48200 963 aaKnown RBP24.1■■□□□ 1.45
SND1-214ENST00000489417 KIF23Q02241 960 aaPredicted RBP24.1■■□□□ 1.45
SND1-214ENST00000489417 CHAMP1Q96JM3 812 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 PIGSQ96S52 555 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 SEC63Q9UGP8 760 aaKnown RBP24.1■■□□□ 1.45
SND1-214ENST00000489417 KCNJ14Q9UNX9 436 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 PAPPA2Q9BXP8 1791 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 MMP1P03956 469 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 SLC16A2P36021 539 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 SAFBQ15424 915 aaKnown RBP eCLIP24.1■■□□□ 1.45
SND1-214ENST00000489417 MAP1SQ66K74 1059 aaPredicted RBP24.1■■□□□ 1.45
SND1-214ENST00000489417 LDHDQ86WU2 507 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 HOMER1Q86YM7 354 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 ADGRF4Q8IZF3 695 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 SHISA4Q96DD7 197 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 JMJD4Q9H9V9 463 aa24.1■■□□□ 1.45
SND1-214ENST00000489417 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.09■■□□□ 1.45
SND1-214ENST00000489417 GPKOWQ92917 476 aaPredicted RBP eCLIP24.09■■□□□ 1.45
SND1-214ENST00000489417 PHF20Q9BVI0 1012 aa24.09■■□□□ 1.45
SND1-214ENST00000489417 NMRK2Q9NPI5 230 aa24.09■■□□□ 1.45
SND1-214ENST00000489417 SH3GLB2Q9NR46 395 aa24.09■■□□□ 1.45
SND1-214ENST00000489417 SNCAIPQ9Y6H5 919 aa24.09■■□□□ 1.45
SND1-214ENST00000489417 USP17L10C9JJH3 530 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 TMEM232C9JQI7 657 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 VGLL4Q14135 290 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 FAM83BQ5T0W9 1011 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 WWC2Q6AWC2 1192 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 BTNL9Q6UXG8 535 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 HEATR3Q7Z4Q2 680 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 ZNF280CQ8ND82 737 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 MTMR8Q96EF0 704 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 CSADQ9Y600 493 aa24.08■■□□□ 1.44
SND1-214ENST00000489417 OTOFQ9HC10 1997 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 KIF28PB7ZC32 967 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 GOLGA6L22H0YM25 854 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 DNM1Q05193 864 aaKnown RBP24.07■■□□□ 1.44
SND1-214ENST00000489417 SPP2Q13103 211 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 IKQ13123 557 aaPredicted RBP24.07■■□□□ 1.44
SND1-214ENST00000489417 GNL2Q13823 731 aaKnown RBP24.07■■□□□ 1.44
SND1-214ENST00000489417 TTLL12Q14166 644 aaPredicted RBP24.07■■□□□ 1.44
SND1-214ENST00000489417 SYDE2Q5VT97 1194 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms