RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
NINJ1-204ENST00000489274 SERPINA10Q9UK55 444 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
NINJ1-204ENST00000489274 STXBP3O00186 592 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 SHMT1P34896 483 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 ZNF174Q15697 407 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 SPECC1Q5M775 1068 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 TYW1BQ6NUM6 668 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 KANK3Q6NY19 840 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
NINJ1-204ENST00000489274 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
NINJ1-204ENST00000489274 WNT7AO00755 349 aa16.64■□□□□ 0.25
NINJ1-204ENST00000489274 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
NINJ1-204ENST00000489274 CDC25BP30305 580 aa16.64■□□□□ 0.25
NINJ1-204ENST00000489274 NFIAQ12857 509 aa16.64■□□□□ 0.25
NINJ1-204ENST00000489274 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
NINJ1-204ENST00000489274 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
NINJ1-204ENST00000489274 CCDC17Q96LX7 622 aa16.64■□□□□ 0.25
NINJ1-204ENST00000489274 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
NINJ1-204ENST00000489274 TTLL1O95922 423 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 SNHG28P0DPA3 235 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 BAG6P46379 1132 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 PTGDRQ13258 359 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 PNOCQ13519 176 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 AOC3Q16853 763 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 ILDR2Q71H61 639 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 CCDC12Q8WUD4 166 aaPredicted RBP16.63■□□□□ 0.25
NINJ1-204ENST00000489274 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
NINJ1-204ENST00000489274 RIOX1Q9H6W3 641 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 MTMR7Q9Y216 660 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 BAZ2BQ9UIF8 2168 aaKnown RBP16.63■□□□□ 0.25
NINJ1-204ENST00000489274 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 ADAMTS3O15072 1205 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 PDHBP11177 359 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 HEATR3Q7Z4Q2 680 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 FOXP4Q8IVH2 680 aaPredicted RBP16.63■□□□□ 0.25
NINJ1-204ENST00000489274 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
NINJ1-204ENST00000489274 SMTNL1A8MU46 457 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 BIN1O00499 593 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 SF3B2Q13435 895 aaKnown RBP16.62■□□□□ 0.25
NINJ1-204ENST00000489274 ARL6IP4Q66PJ3 421 aaKnown RBP16.62■□□□□ 0.25
NINJ1-204ENST00000489274 SLC16A10Q8TF71 515 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 MRFAP1L1Q96HT8 127 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 SERTAD1Q9UHV2 236 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 PCDHA5Q9Y5H7 936 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 ACTN4O43707 911 aaKnown RBP16.62■□□□□ 0.25
NINJ1-204ENST00000489274 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
NINJ1-204ENST00000489274 CCDC34Q96HJ3 373 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
NINJ1-204ENST00000489274 CCDC194A0A1B0GVG4 234 aa16.61■□□□□ 0.25
NINJ1-204ENST00000489274 IKBKBO14920 756 aa16.61■□□□□ 0.25
NINJ1-204ENST00000489274 C21orf2O43822 256 aa16.61■□□□□ 0.25
NINJ1-204ENST00000489274 SARSP49591 514 aaKnown RBP16.61■□□□□ 0.25
NINJ1-204ENST00000489274 POSTNQ15063 836 aa16.61■□□□□ 0.25
NINJ1-204ENST00000489274 RTKN2Q8IZC4 609 aa16.61■□□□□ 0.25
NINJ1-204ENST00000489274 C4orf32Q8N8J7 132 aa16.61■□□□□ 0.25
NINJ1-204ENST00000489274 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
NINJ1-204ENST00000489274 SEC63Q9UGP8 760 aaKnown RBP16.61■□□□□ 0.25
NINJ1-204ENST00000489274 SCN9AQ15858 1988 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 GNA11P29992 359 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 RBM5P52756 815 aaKnown RBP eCLIP16.6■□□□□ 0.25
NINJ1-204ENST00000489274 RASGRP2Q7LDG7 609 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 SPC24Q8NBT2 197 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 PSMD1Q99460 953 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 PDGFDQ9GZP0 370 aaPredicted RBP16.6■□□□□ 0.25
NINJ1-204ENST00000489274 C6orf50Q9HD87 102 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 PCDHAC2Q9Y5I4 1007 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 ADAMTSL1Q8N6G6 1762 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 ESYT2A0FGR8 921 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 YDJCA8MPS7 323 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 SLFN14P0C7P3 912 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 NAPAP54920 295 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 NCAPHQ15003 741 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
NINJ1-204ENST00000489274 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
NINJ1-204ENST00000489274 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
NINJ1-204ENST00000489274 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
NINJ1-204ENST00000489274 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
NINJ1-204ENST00000489274 FOXN1O15353 648 aa16.59■□□□□ 0.25
NINJ1-204ENST00000489274 MCM7P33993 719 aa16.59■□□□□ 0.25
NINJ1-204ENST00000489274 TPM4P67936 248 aa16.59■□□□□ 0.25
NINJ1-204ENST00000489274 SH3RF1Q7Z6J0 888 aa16.59■□□□□ 0.25
NINJ1-204ENST00000489274 TRIML1Q8N9V2 468 aa16.59■□□□□ 0.25
NINJ1-204ENST00000489274 ZNF830Q96NB3 372 aaPredicted RBP16.59■□□□□ 0.25
NINJ1-204ENST00000489274 PIGSQ96S52 555 aa16.59■□□□□ 0.25
NINJ1-204ENST00000489274 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms