RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TRIT1Q9H3H1 467 aaKnown RBP6.47□□□□□ -1.37
XRN1-213ENST00000489241 TMEM59LQ9UK28 342 aa6.47□□□□□ -1.37
XRN1-213ENST00000489241 STK10O94804 968 aaKnown RBP6.46□□□□□ -1.38
XRN1-213ENST00000489241 TSPAN15O95858 294 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 SSBP05455 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
XRN1-213ENST00000489241 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 SOGA3Q5TF21 947 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 FBXW10Q5XX13 1052 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 PRR23BQ6ZRT6 265 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 TTC6Q86TZ1 520 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 PPP1R13LQ8WUF5 828 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 PIF1Q9H611 641 aa6.46□□□□□ -1.38
XRN1-213ENST00000489241 DNAJC25-GNG10A0A024R161 153 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 RBAK-RBAKDNI3L0D1 243 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 EIF6P56537 245 aaKnown RBP6.45□□□□□ -1.38
XRN1-213ENST00000489241 GAB4Q2WGN9 574 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 RALGPS1Q5JS13 557 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 CREG2Q8IUH2 290 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 DTWD2Q8NBA8 298 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 SRRTQ9BXP5 876 aaKnown RBP6.45□□□□□ -1.38
XRN1-213ENST00000489241 GPR62Q9BZJ7 368 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 DUSP15Q9H1R2 295 aaPredicted RBP6.45□□□□□ -1.38
XRN1-213ENST00000489241 GPATCH2Q9NW75 528 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 KLHL3Q9UH77 587 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 KCNH3Q9ULD8 1083 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
XRN1-213ENST00000489241 SLC22A31A6NKX4 558 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 SRFP11831 508 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 HSP90B1P14625 803 aaKnown RBP6.44□□□□□ -1.38
XRN1-213ENST00000489241 TPP2P29144 1249 aaPredicted RBP6.44□□□□□ -1.38
XRN1-213ENST00000489241 SPOCD1Q6ZMY3 1216 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 SLFN12Q8IYM2 578 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 RBBP8NLQ8NC74 664 aaPredicted RBP6.44□□□□□ -1.38
XRN1-213ENST00000489241 OR6P1Q8NGX9 317 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 ABHD4Q8TB40 342 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 RNF141Q8WVD5 230 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 OSBPL2Q9H1P3 480 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 ZSWIM4Q9H7M6 989 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 GMIPQ9P107 970 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 DUSP13Q9UII6 198 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 PPT2Q9UMR5 302 aa6.44□□□□□ -1.38
XRN1-213ENST00000489241 WASH4PA8MWX3 477 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 UPK3BL1B0FP48 263 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 CHURC1-FNTBB4DL54 471 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 UPK3BL2E5RIL1 263 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 RAP1GAPP47736 663 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 CHMP4BP1P59074 171 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 SYDE1Q6ZW31 735 aaPredicted RBP6.43□□□□□ -1.38
XRN1-213ENST00000489241 CILP2Q8IUL8 1156 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 PHACTR4Q8IZ21 702 aa6.43□□□□□ -1.38
XRN1-213ENST00000489241 FBXO15Q8NCQ5 510 aaPredicted RBP6.43□□□□□ -1.38
XRN1-213ENST00000489241 NSUN3Q9H649 340 aaKnown RBP6.43□□□□□ -1.38
XRN1-213ENST00000489241 TLDC2A0PJX2 215 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 MEIS3P2A8K0S8 358 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 HPXP02790 462 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 HMGB1P09429 215 aaKnown RBP6.42□□□□□ -1.38
XRN1-213ENST00000489241 GBP1P32455 592 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 HK2P52789 917 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 ARSHQ5FYA8 562 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 CDCP2Q5VXM1 449 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 CCDC81Q6ZN84 652 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 TSPYL5Q86VY4 417 aaPredicted RBP6.42□□□□□ -1.38
XRN1-213ENST00000489241 MYLIPQ8WY64 445 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 CCDC74BQ96LY2 380 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 TOX2Q96NM4 488 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 DIRC2Q96SL1 478 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 ZNF408Q9H9D4 720 aa6.42□□□□□ -1.38
XRN1-213ENST00000489241 RAG1P15918 1043 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 LTKP29376 864 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 ETFBP38117 255 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 GIPRP48546 466 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 EGR3Q06889 387 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 INTS3Q68E01 1043 aaKnown RBP6.41□□□□□ -1.38
XRN1-213ENST00000489241 NLRC3Q7RTR2 1065 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 CKAP2LQ8IYA6 745 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 ATG4CQ96DT6 458 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 TM9SF2Q99805 663 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 ASPNQ9BXN1 380 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 EPB41L4BQ9H329 900 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
XRN1-213ENST00000489241 TMA7Q9Y2S6 64 aaKnown RBP6.41□□□□□ -1.38
XRN1-213ENST00000489241 NFIBO00712 420 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 NME1P15531 152 aaKnown RBP6.4□□□□□ -1.38
XRN1-213ENST00000489241 CCNFP41002 786 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 ERVFC1P60507 584 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 SERINC3Q13530 473 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 BMS1Q14692 1282 aaKnown RBP6.4□□□□□ -1.38
XRN1-213ENST00000489241 FBLN7Q53RD9 439 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 OVOS1Q6IE37 1185 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 PDZD8Q8NEN9 1154 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 ANAPC16Q96DE5 110 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 KREMEN1Q96MU8 473 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 ADAMTS10Q9H324 1103 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 TBX22Q9Y458 520 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 MRVI1Q9Y6F6 885 aa6.4□□□□□ -1.38
XRN1-213ENST00000489241 RGS13O14921 159 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 DNAJA2O60884 412 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 ZGLP1P0C6A0 271 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms