RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
USP48-210ENST00000489108 LENG1Q96BZ8 264 aaPredicted RBP19.65■□□□□ 0.74
USP48-210ENST00000489108 TOX2Q96NM4 488 aa19.65■□□□□ 0.74
USP48-210ENST00000489108 MMP19Q99542 508 aa19.65■□□□□ 0.74
USP48-210ENST00000489108 MCM9Q9NXL9 1143 aa19.65■□□□□ 0.74
USP48-210ENST00000489108 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 GRXCR1A8MXD5 290 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 DCDC2CA8MYV0 355 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 SLC25A27O95847 323 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 TIMP1P01033 207 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 PBX2P40425 430 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 ZNF792Q3KQV3 632 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 CLEC10AQ8IUN9 316 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 ATXN2LQ8WWM7 1075 aaKnown RBP19.64■□□□□ 0.73
USP48-210ENST00000489108 GAS2L1Q99501 681 aaPredicted RBP19.64■□□□□ 0.73
USP48-210ENST00000489108 PRDM12Q9H4Q4 367 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 PLXNA1Q9UIW2 1896 aa19.64■□□□□ 0.73
USP48-210ENST00000489108 COL11A1P12107 1806 aaPredicted RBP19.63■□□□□ 0.73
USP48-210ENST00000489108 ADAMTS4O75173 837 aa19.63■□□□□ 0.73
USP48-210ENST00000489108 ACLYP53396 1101 aa19.63■□□□□ 0.73
USP48-210ENST00000489108 TMEM179Q6ZVK1 233 aa19.63■□□□□ 0.73
USP48-210ENST00000489108 C16orf59Q7L2K0 433 aa19.63■□□□□ 0.73
USP48-210ENST00000489108 ASB2Q96Q27 587 aa19.63■□□□□ 0.73
USP48-210ENST00000489108 TSEN34Q9BSV6 310 aaKnown RBP19.63■□□□□ 0.73
USP48-210ENST00000489108 STARD7Q9NQZ5 370 aa19.63■□□□□ 0.73
USP48-210ENST00000489108 DIS3Q9Y2L1 958 aaKnown RBP19.63■□□□□ 0.73
USP48-210ENST00000489108 NOP58Q9Y2X3 529 aaKnown RBP19.63■□□□□ 0.73
USP48-210ENST00000489108 TMX2Q9Y320 296 aa19.63■□□□□ 0.73
USP48-210ENST00000489108 NAV1Q8NEY1 1877 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 CYP2D6P10635 497 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 AKR1A1P14550 325 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 TMED8Q6PL24 325 aaPredicted RBP19.62■□□□□ 0.73
USP48-210ENST00000489108 CCDC129Q6ZRS4 1044 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 TMEM57Q8N5G2 664 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 DYNLL2Q96FJ2 89 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 PBX4Q9BYU1 374 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 CRNKL1Q9BZJ0 848 aaKnown RBP19.62■□□□□ 0.73
USP48-210ENST00000489108 C1orf115Q9H7X2 142 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 VCPKMTQ9H867 229 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 ADAMTS5Q9UNA0 930 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 PARP14Q460N5 1801 aa19.62■□□□□ 0.73
USP48-210ENST00000489108 KCTD2Q14681 263 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 CCDC85BQ15834 202 aaPredicted RBP19.61■□□□□ 0.73
USP48-210ENST00000489108 KCNA10Q16322 511 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 TMEM240Q5SV17 173 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 AKNAD1Q5T1N1 836 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 MFSD5Q6N075 450 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 RIOX2Q8IUF8 465 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 NUP133Q8WUM0 1156 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 SDR42E1Q8WUS8 393 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 ARHGEF10LQ9HCE6 1279 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 FBXO28Q9NVF7 368 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 THEGQ9P2T0 379 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 TBX21Q9UL17 535 aa19.61■□□□□ 0.73
USP48-210ENST00000489108 WDR46O15213 610 aaKnown RBP19.6■□□□□ 0.73
USP48-210ENST00000489108 AKR1B1P15121 316 aa19.6■□□□□ 0.73
USP48-210ENST00000489108 STAT3P40763 770 aa19.6■□□□□ 0.73
USP48-210ENST00000489108 ICA1Q05084 483 aa19.6■□□□□ 0.73
USP48-210ENST00000489108 KLHDC9Q8NEP7 349 aa19.6■□□□□ 0.73
USP48-210ENST00000489108 ADAMTS19Q8TE59 1207 aa19.6■□□□□ 0.73
USP48-210ENST00000489108 DCP1AQ9NPI6 582 aaPredicted RBP19.6■□□□□ 0.73
USP48-210ENST00000489108 SYNRGQ9UMZ2 1314 aa19.59■□□□□ 0.73
USP48-210ENST00000489108 MRPS5P82675 430 aaKnown RBP19.59■□□□□ 0.73
USP48-210ENST00000489108 PPIGQ13427 754 aaKnown RBP eCLIP19.59■□□□□ 0.73
USP48-210ENST00000489108 ADGRE1Q14246 886 aa19.59■□□□□ 0.73
USP48-210ENST00000489108 SLC9C2Q5TAH2 1124 aa19.59■□□□□ 0.73
USP48-210ENST00000489108 RASIP1Q5U651 963 aa19.59■□□□□ 0.73
USP48-210ENST00000489108 CCSAPQ6IQ19 270 aaPredicted RBP19.59■□□□□ 0.73
USP48-210ENST00000489108 SH2D4AQ9H788 454 aa19.59■□□□□ 0.73
USP48-210ENST00000489108 CNPY2Q9Y2B0 182 aa19.59■□□□□ 0.73
USP48-210ENST00000489108 MYH8P13535 1937 aa19.59■□□□□ 0.73
USP48-210ENST00000489108 ROBO3Q96MS0 1386 aa19.58■□□□□ 0.73
USP48-210ENST00000489108 MOXD2PA6NHM9 499 aa19.58■□□□□ 0.72
USP48-210ENST00000489108 ACRP10323 421 aa19.58■□□□□ 0.72
USP48-210ENST00000489108 CSF2RAP15509 400 aa19.58■□□□□ 0.72
USP48-210ENST00000489108 PDE6AP16499 860 aa19.58■□□□□ 0.72
USP48-210ENST00000489108 IRX5P78411 483 aaPredicted RBP19.58■□□□□ 0.72
USP48-210ENST00000489108 UHRF1Q96T88 793 aaPredicted RBP19.58■□□□□ 0.72
USP48-210ENST00000489108 SWAP70Q9UH65 585 aa19.58■□□□□ 0.72
USP48-210ENST00000489108 FAM184BQ9ULE4 1060 aa19.58■□□□□ 0.72
USP48-210ENST00000489108 MYADML2A6NDP7 307 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 VWA5AO00534 786 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 SNAI1O95863 264 aaPredicted RBP19.57■□□□□ 0.72
USP48-210ENST00000489108 IGFBP4P22692 258 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 CDK7P50613 346 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 CCDC174Q6PII3 467 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 ZNF365Q70YC5 407 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 LCORLQ8N3X6 602 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 NCOR1O75376 2440 aa19.57■□□□□ 0.72
USP48-210ENST00000489108 ZNF532Q9HCE3 1301 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 SMIM22K7EJ46 135 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 EEF2P13639 858 aaKnown RBP19.56■□□□□ 0.72
USP48-210ENST00000489108 PLA2G5P39877 138 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 AACSQ86V21 672 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 TMEM199Q8N511 208 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 REPS2Q8NFH8 660 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 VTI1AQ96AJ9 217 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 GLT1D1Q96MS3 346 aa19.56■□□□□ 0.72
USP48-210ENST00000489108 ZNF214Q9UL59 606 aaPredicted RBP19.56■□□□□ 0.72
USP48-210ENST00000489108 ELP1O95163 1332 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms