RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TCTN2Q96GX1 697 aa6.14□□□□□ -1.43
RFC4-213ENST00000489028 FAM86C1Q9NVL1 165 aa6.14□□□□□ -1.43
RFC4-213ENST00000489028 EBF1Q9UH73 591 aa6.14□□□□□ -1.43
RFC4-213ENST00000489028 SIGLEC6O43699 453 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 ATF4P18848 351 aaPredicted RBP6.13□□□□□ -1.43
RFC4-213ENST00000489028 GDNFP39905 211 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 HK2P52789 917 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 AUHQ13825 339 aaKnown RBP6.13□□□□□ -1.43
RFC4-213ENST00000489028 AXDND1Q5T1B0 1012 aaPredicted RBP6.13□□□□□ -1.43
RFC4-213ENST00000489028 DCAF15Q66K64 600 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 TTC6Q86TZ1 520 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 USHBP1Q8N6Y0 703 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 DAGLBQ8NCG7 672 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 ENOX1Q8TC92 643 aaKnown RBP6.13□□□□□ -1.43
RFC4-213ENST00000489028 SEC16BQ96JE7 1060 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 FMNL2Q96PY5 1086 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 TINF2Q9BSI4 451 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 SP110Q9HB58 689 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 GFOD1Q9NXC2 390 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 TMEM59LQ9UK28 342 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 ZNF281Q9Y2X9 895 aa6.13□□□□□ -1.43
RFC4-213ENST00000489028 A0A1W2PQH9 124 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 BIN1O00499 593 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 ZGLP1P0C6A0 271 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 CTSKP43235 329 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 BBS9Q3SYG4 887 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 FAM168AQ92567 244 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 DHRS1Q96LJ7 313 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 CRBNQ96SW2 442 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 FOXP3Q9BZS1 431 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 ASCC2Q9H1I8 757 aaPredicted RBP6.12□□□□□ -1.43
RFC4-213ENST00000489028 ZNF214Q9UL59 606 aaPredicted RBP6.12□□□□□ -1.43
RFC4-213ENST00000489028 RNF114Q9Y508 228 aa6.12□□□□□ -1.43
RFC4-213ENST00000489028 TMEM82A0PJX8 343 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.11□□□□□ -1.43
RFC4-213ENST00000489028 MEIS1O00470 390 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 PAX4O43316 350 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 TP53P04637 393 aaPredicted RBP6.11□□□□□ -1.43
RFC4-213ENST00000489028 ZPBP2Q6X784 338 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 CCDC144CPQ8IYA2 1237 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 C7orf61Q8IZ16 206 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 C19orf47Q8N9M1 422 aaKnown RBP6.11□□□□□ -1.43
RFC4-213ENST00000489028 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 G6PC3Q9BUM1 346 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 CHST7Q9NS84 486 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 FBXL21Q9UKT6 434 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 PCDHB10Q9UN67 800 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 PCDHB12Q9Y5F1 795 aa6.11□□□□□ -1.43
RFC4-213ENST00000489028 ZNF503-AS2A6NEH8 195 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 TRHRP34981 398 aaPredicted RBP6.1□□□□□ -1.43
RFC4-213ENST00000489028 TIGD5Q53EQ6 642 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 ZSWIM9Q86XI8 627 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 ZNF655Q8N720 491 aaPredicted RBP6.1□□□□□ -1.43
RFC4-213ENST00000489028 OR6P1Q8NGX9 317 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 CPLX3Q8WVH0 158 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 KLHL6Q8WZ60 621 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFC4-213ENST00000489028 TCFL5Q9UL49 500 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 ZNF451Q9Y4E5 1061 aa6.1□□□□□ -1.43
RFC4-213ENST00000489028 E9PSI1 815 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 CBFA2T2O43439 604 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 FKTNO75072 461 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 EFEMP2O95967 443 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 HPXP02790 462 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 SYPP08247 313 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 AFMP43652 599 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 CRTC3Q6UUV7 619 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 RNF111Q6ZNA4 994 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 LINC00116Q8NCU8 138 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 KIRREL1Q96J84 757 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 GP6Q9HCN6 339 aa6.09□□□□□ -1.43
RFC4-213ENST00000489028 FGRP09769 529 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 CASP7P55210 303 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 ZNF445P59923 1031 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 PPP2R5EQ16537 467 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 KCNMB1Q16558 191 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 ANKRD39Q53RE8 183 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 LINC01599Q8WXQ3 324 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 SMARCC1Q92922 1105 aaPredicted RBP6.08□□□□□ -1.44
RFC4-213ENST00000489028 LIN37Q96GY3 246 aaPredicted RBP6.08□□□□□ -1.44
RFC4-213ENST00000489028 CCDC120Q96HB5 630 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 C19orf44Q9H6X5 657 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 PRR13Q9NZ81 148 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 STRIP2Q9ULQ0 834 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 MRVI1Q9Y6F6 885 aa6.08□□□□□ -1.44
RFC4-213ENST00000489028 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
RFC4-213ENST00000489028 H0Y8X5 98 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 CD247P20963 164 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 RPL10P27635 214 aaKnown RBP6.07□□□□□ -1.44
RFC4-213ENST00000489028 CEBPAP49715 358 aaPredicted RBP6.07□□□□□ -1.44
RFC4-213ENST00000489028 PCBP3P57721 371 aaKnown RBP6.07□□□□□ -1.44
RFC4-213ENST00000489028 GNPTABQ3T906 1256 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 OGFOD2Q6N063 350 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 WAPLQ7Z5K2 1190 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 PDZD8Q8NEN9 1154 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 BRF1Q92994 677 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms