RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
COL21A1-211ENST00000488912 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 FIBPO43427 364 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
COL21A1-211ENST00000488912 MMP1P03956 469 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 SCG2P13521 617 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 ECE1P42892 770 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 CCDC96Q2M329 555 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 UBA5Q9GZZ9 404 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 LMBRD1Q9NUN5 540 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
COL21A1-211ENST00000488912 PPP2R3BQ9Y5P8 575 aa12.62□□□□□ -0.39
COL21A1-211ENST00000488912 ASNSP08243 561 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 EPHX2P34913 555 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 KCTD1Q719H9 257 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 CCDC84Q86UT8 332 aaPredicted RBP12.61□□□□□ -0.39
COL21A1-211ENST00000488912 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 ARHGEF10LQ9HCE6 1279 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 WDR90Q96KV7 1748 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 F5H6K3 240 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 SLC1A4P43007 532 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 KRT85P78386 507 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 KLRC3Q07444 240 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 GPATCH4Q5T3I0 446 aaKnown RBP12.61□□□□□ -0.39
COL21A1-211ENST00000488912 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 TTBK2Q6IQ55 1244 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 DLK2Q6UY11 383 aa12.61□□□□□ -0.39
COL21A1-211ENST00000488912 GPKOWQ92917 476 aaPredicted RBP eCLIP12.61□□□□□ -0.39
COL21A1-211ENST00000488912 NDUFB10O96000 172 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 XBP1P17861 261 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 INPP5BP32019 993 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 USP48Q86UV5 1035 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 DIS3L2Q8IYB7 885 aaKnown RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 DCPSQ96C86 337 aaKnown RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 PHF20Q9BVI0 1012 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 ZNF341Q9BYN7 854 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 GLIS2Q9BZE0 524 aaPredicted RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 TFIP11Q9UBB9 837 aaKnown RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 BTBD18B2RXH4 712 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 SLC16A2P36021 539 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 GNL2Q13823 731 aaKnown RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 NUP88Q99567 741 aaPredicted RBP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 FTOQ9C0B1 505 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL21A1-211ENST00000488912 RIOX1Q9H6W3 641 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
COL21A1-211ENST00000488912 PTMSP20962 102 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 SAFBQ15424 915 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL21A1-211ENST00000488912 KIAA1755Q5JYT7 1200 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 WWC2Q6AWC2 1192 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 SULF1Q8IWU6 871 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
COL21A1-211ENST00000488912 GMCL1Q96IK5 515 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 PIGSQ96S52 555 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 WRNIP1Q96S55 665 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 OTOFQ9HC10 1997 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 POTECB2RU33 542 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 TRAK2O60296 914 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 NR5A1Q13285 461 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 HSP90AA2PQ14568 343 aaPredicted RBP12.59□□□□□ -0.39
COL21A1-211ENST00000488912 NPY5RQ15761 445 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 MYSM1Q5VVJ2 828 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 ADGRF4Q8IZF3 695 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 PHIPQ8WWQ0 1821 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 TAF1DQ9H5J8 278 aaPredicted RBP12.59□□□□□ -0.39
COL21A1-211ENST00000488912 RRAGDQ9NQL2 400 aaPredicted RBP12.59□□□□□ -0.39
COL21A1-211ENST00000488912 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
COL21A1-211ENST00000488912 ZNF112Q9UJU3 913 aa12.59□□□□□ -0.39
COL21A1-211ENST00000488912 PAPPA2Q9BXP8 1791 aa12.58□□□□□ -0.4
COL21A1-211ENST00000488912 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
COL21A1-211ENST00000488912 CEBPZQ03701 1054 aaKnown RBP12.58□□□□□ -0.4
COL21A1-211ENST00000488912 ZYXQ15942 572 aaKnown RBP12.58□□□□□ -0.4
COL21A1-211ENST00000488912 SUPT20HL1Q3ZLR7 823 aa12.58□□□□□ -0.4
COL21A1-211ENST00000488912 NOSTRINQ8IVI9 506 aa12.58□□□□□ -0.4
COL21A1-211ENST00000488912 ZKSCAN4Q969J2 545 aaPredicted RBP12.58□□□□□ -0.4
COL21A1-211ENST00000488912 USP28Q96RU2 1077 aa12.58□□□□□ -0.4
COL21A1-211ENST00000488912 FOXP1Q9H334 677 aaPredicted RBP12.58□□□□□ -0.4
COL21A1-211ENST00000488912 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
COL21A1-211ENST00000488912 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
COL21A1-211ENST00000488912 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms