RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 C17orf99Q6UX52 265 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
NUP98-212ENST00000488828 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
NUP98-212ENST00000488828 RPAP3Q9H6T3 665 aaPredicted RBP13.05□□□□□ -0.32
NUP98-212ENST00000488828 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 TMX2Q9Y320 296 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 ROBO3Q96MS0 1386 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 ST18O60284 1047 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 VCAM1P19320 739 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
NUP98-212ENST00000488828 PSMC4P43686 418 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
NUP98-212ENST00000488828 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 SIAH1Q8IUQ4 282 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 PAGR1Q9BTK6 254 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUP98-212ENST00000488828 MCOLN1Q9GZU1 580 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 STX8Q9UNK0 236 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 RAD50Q92878 1312 aa13.04□□□□□ -0.32
NUP98-212ENST00000488828 DDX60LQ5H9U9 1706 aaKnown RBP13.04□□□□□ -0.32
NUP98-212ENST00000488828 SGSM2O43147 1006 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 TTLL1O95922 423 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 HERVK_113P62684 666 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
NUP98-212ENST00000488828 PKN2Q16513 984 aaKnown RBP13.03□□□□□ -0.32
NUP98-212ENST00000488828 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 LPAR1Q92633 364 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 CEP95Q96GE4 821 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 IL25Q9H293 177 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 VCPKMTQ9H867 229 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
NUP98-212ENST00000488828 MTMR4Q9NYA4 1195 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
NUP98-212ENST00000488828 ARIH1Q9Y4X5 557 aaPredicted RBP13.03□□□□□ -0.32
NUP98-212ENST00000488828 PHIPQ8WWQ0 1821 aa13.02□□□□□ -0.32
NUP98-212ENST00000488828 ORC4O43929 436 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 FLOT1O75955 427 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 HOXD10P28358 340 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 FCGRTP55899 365 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 PTH1RQ03431 593 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 COG2Q14746 738 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 OTOP1Q7RTM1 612 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 PLPP6Q8IY26 295 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 ESR2Q92731 530 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 ARHGAP39Q9C0H5 1083 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
NUP98-212ENST00000488828 ZMYM6O95789 1325 aa13.02□□□□□ -0.33
NUP98-212ENST00000488828 F5H6K3 240 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
NUP98-212ENST00000488828 NMT2O60551 498 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 CDC45O75419 566 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 BCRP11274 1271 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
NUP98-212ENST00000488828 KLRC3Q07444 240 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 TRDNQ13061 729 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 KIAA1755Q5JYT7 1200 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 TBC1D10CQ8IV04 446 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
NUP98-212ENST00000488828 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 ESYT1Q9BSJ8 1104 aa13.01□□□□□ -0.33
NUP98-212ENST00000488828 MYH8P13535 1937 aa13□□□□□ -0.33
NUP98-212ENST00000488828 ADGRA2Q96PE1 1338 aa13□□□□□ -0.33
NUP98-212ENST00000488828 IGKV6D-41A0A0C4DH26 115 aa13□□□□□ -0.33
NUP98-212ENST00000488828 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
NUP98-212ENST00000488828 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
NUP98-212ENST00000488828 PEX10O60683 326 aa13□□□□□ -0.33
NUP98-212ENST00000488828 KDM4AO75164 1064 aa13□□□□□ -0.33
NUP98-212ENST00000488828 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
NUP98-212ENST00000488828 PLS1Q14651 629 aa13□□□□□ -0.33
NUP98-212ENST00000488828 FAM110CQ1W6H9 321 aa13□□□□□ -0.33
NUP98-212ENST00000488828 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
NUP98-212ENST00000488828 FAM83BQ5T0W9 1011 aa13□□□□□ -0.33
NUP98-212ENST00000488828 WDR78Q5VTH9 848 aa13□□□□□ -0.33
NUP98-212ENST00000488828 SLFN13Q68D06 897 aa13□□□□□ -0.33
NUP98-212ENST00000488828 FBXO46Q6PJ61 603 aaPredicted RBP13□□□□□ -0.33
NUP98-212ENST00000488828 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
NUP98-212ENST00000488828 GTF3C2Q8WUA4 911 aaPredicted RBP13□□□□□ -0.33
NUP98-212ENST00000488828 MKL1Q969V6 931 aa13□□□□□ -0.33
NUP98-212ENST00000488828 COA7Q96BR5 231 aa13□□□□□ -0.33
NUP98-212ENST00000488828 ABHD8Q96I13 439 aa13□□□□□ -0.33
NUP98-212ENST00000488828 TRIM47Q96LD4 638 aa13□□□□□ -0.33
NUP98-212ENST00000488828 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
NUP98-212ENST00000488828 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
NUP98-212ENST00000488828 KRT23Q9C075 422 aa13□□□□□ -0.33
NUP98-212ENST00000488828 IL17RBQ9NRM6 502 aa13□□□□□ -0.33
NUP98-212ENST00000488828 RBPJLQ9UBG7 517 aa13□□□□□ -0.33
NUP98-212ENST00000488828 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
NUP98-212ENST00000488828 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
NUP98-212ENST00000488828 B4E1Z4 1266 aa12.99□□□□□ -0.33
NUP98-212ENST00000488828 NDUFB10O96000 172 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms