RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 WLSQ5T9L3 541 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 CNGA4Q8IV77 575 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 HGSO14964 777 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-229ENST00000488765 EVA1CP58658 441 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 PPP1R7Q15435 360 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 APTXQ7Z2E3 356 aaKnown RBP18.1■□□□□ 0.49
MCF2L-229ENST00000488765 EPN3Q9H201 632 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 GGT7Q9UJ14 662 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 NFU1Q9UMS0 254 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 BTBD18B2RXH4 712 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 OPA1O60313 960 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
MCF2L-229ENST00000488765 MDM2Q00987 491 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-229ENST00000488765 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 CYP26C1Q6V0L0 522 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 MICALCLQ6ZW33 695 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 TMTC1Q8IUR5 882 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 ZNF274Q96GC6 653 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-229ENST00000488765 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 GOLGA8KD6RF30 607 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 TUBBP07437 444 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 IRX1P78414 480 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-229ENST00000488765 FKBP4Q02790 459 aaKnown RBP eCLIP18.09■□□□□ 0.49
MCF2L-229ENST00000488765 UBXN1Q04323 297 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 KRT26Q7Z3Y9 468 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 ZMYM6O95789 1325 aa18.09■□□□□ 0.49
MCF2L-229ENST00000488765 NCK2O43639 380 aa18.08■□□□□ 0.49
MCF2L-229ENST00000488765 MLKLQ8NB16 471 aa18.08■□□□□ 0.49
MCF2L-229ENST00000488765 AENQ8WTP8 325 aaKnown RBP18.08■□□□□ 0.49
MCF2L-229ENST00000488765 ANKARQ7Z5J8 1434 aa18.08■□□□□ 0.49
MCF2L-229ENST00000488765 GRM8O00222 908 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 ERCC3P19447 782 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 DPYDQ12882 1025 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 C11orf91Q3C1V1 193 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 ODF2Q5BJF6 829 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 EPSTI1Q96J88 318 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 SYNRGQ9UMZ2 1314 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 PPP1R37O75864 691 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 NR1D1P20393 614 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 PTGISQ16647 500 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 UBE3BQ7Z3V4 1068 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 RASSF8Q8NHQ8 419 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 MS4A14Q96JA4 679 aa18.08■□□□□ 0.48
MCF2L-229ENST00000488765 MCM3P25205 808 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 CARSP49589 748 aaKnown RBP18.07■□□□□ 0.48
MCF2L-229ENST00000488765 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
MCF2L-229ENST00000488765 KSR2Q6VAB6 950 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 NAA15Q9BXJ9 866 aaKnown RBP18.07■□□□□ 0.48
MCF2L-229ENST00000488765 ZNF233A6NK53 670 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 TUBB2AQ13885 445 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 KRT31Q15323 416 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 CFAP58Q5T655 872 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 NFRKBQ6P4R8 1299 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 KRI1Q8N9T8 703 aaKnown RBP18.07■□□□□ 0.48
MCF2L-229ENST00000488765 RSRC1Q96IZ7 334 aaKnown RBP18.07■□□□□ 0.48
MCF2L-229ENST00000488765 TUBB2BQ9BVA1 445 aa18.07■□□□□ 0.48
MCF2L-229ENST00000488765 PXDNQ92626 1479 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 TTC26A0AVF1 554 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 PHF20L1A8MW92 1017 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 NEXNQ0ZGT2 675 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 MORC3Q14149 939 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 NBPF20Q3BBV1 942 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 GNPTABQ3T906 1256 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 PLCD1P51178 756 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 HERVK_113P62684 666 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 PTPROQ16827 1216 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 CYFIP2Q96F07 1278 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 BORCS6Q96GS4 357 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 CYP27B1O15528 508 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 TUBB4BP68371 445 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 GRIK3Q13003 919 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 NR5A1Q13285 461 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 ZKSCAN8Q15776 578 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-229ENST00000488765 TNNI3KQ59H18 835 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 MAP3K14Q99558 947 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 VPS54Q9P1Q0 977 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 FPGT-TNNI3KV9GXZ4 949 aa18.06■□□□□ 0.48
MCF2L-229ENST00000488765 ANKRD18BA2A2Z9 1011 aa18.05■□□□□ 0.48
MCF2L-229ENST00000488765 PCMTD1Q96MG8 357 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-229ENST00000488765 PCDHB6Q9Y5E3 794 aa18.05■□□□□ 0.48
MCF2L-229ENST00000488765 DDX58O95786 925 aaKnown RBP18.05■□□□□ 0.48
MCF2L-229ENST00000488765 TBC1D1Q86TI0 1168 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-229ENST00000488765 SAAL1Q96ER3 474 aa18.05■□□□□ 0.48
MCF2L-229ENST00000488765 MLXIPQ9HAP2 919 aa18.05■□□□□ 0.48
MCF2L-229ENST00000488765 KLHL33A6NCF5 533 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 PICK1Q9NRD5 415 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 ETAA1Q9NY74 926 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 M0R2C6 588 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 KLK7P49862 253 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 SPATA1Q5VX52 437 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 SLC26A6Q9BXS9 759 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 GUCY2DQ02846 1103 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 RALYLQ86SE5 291 aaKnown RBP18.04■□□□□ 0.48
MCF2L-229ENST00000488765 IFNL2Q8IZJ0 200 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 NOD2Q9HC29 1040 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms