RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 ICA1Q05084 483 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 SSRP1Q08945 709 aaKnown RBP8.8□□□□□ -1
APOBEC3A-203ENST00000488758 TROAPQ12815 778 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 SEPT2Q15019 361 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 LARP1BQ659C4 914 aaKnown RBP8.8□□□□□ -1
APOBEC3A-203ENST00000488758 KRT26Q7Z3Y9 468 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 DDX11Q96FC9 970 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 MAP3K14Q99558 947 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 RRAGCQ9HB90 399 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 NYAP2Q9P242 653 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 POLR2AP24928 1970 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 PTPDC1A2A3K4 754 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 RAD21O60216 631 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 PPP1R12BO60237 982 aaPredicted RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 JAK2O60674 1132 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 CTNND1O60716 968 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 DTNBO60941 627 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 CTDNEP1O95476 244 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 ASNSP08243 561 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 EEF2P13639 858 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 IFNAR1P17181 557 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 GUCY1A2P33402 732 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 AKAP17AQ02040 695 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 RRP1BQ14684 758 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 GRM4Q14833 912 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 CDC37L1Q7L3B6 337 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 USP48Q86UV5 1035 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 TRIM22Q8IYM9 498 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 LRRC47Q8N1G4 583 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 NSUN7Q8NE18 718 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 SMARCC2Q8TAQ2 1214 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 RBM46Q8TBY0 533 aaKnown RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 MKL1Q969V6 931 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 GINM1Q9NU53 330 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 ORC3Q9UBD5 711 aaPredicted RBP8.79□□□□□ -1
APOBEC3A-203ENST00000488758 SIPA1L1O43166 1804 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 SCN4AP35499 1836 aa8.79□□□□□ -1
APOBEC3A-203ENST00000488758 NID2Q14112 1375 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 PHF20L1A8MW92 1017 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 ADM5C9JUS6 153 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 H3BQV1 296 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 PARP1P09874 1014 aaKnown RBP8.78□□□□□ -1
APOBEC3A-203ENST00000488758 HOXB1P14653 301 aaPredicted RBP8.78□□□□□ -1
APOBEC3A-203ENST00000488758 DDIT3P35638 169 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 PRKG1Q13976 671 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 SHROOM1Q2M3G4 852 aaPredicted RBP8.78□□□□□ -1
APOBEC3A-203ENST00000488758 CLEC10AQ8IUN9 316 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 CCDC82Q8N4S0 544 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 WASF1Q92558 559 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 LZTS2Q9BRK4 669 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 SLC26A6Q9BXS9 759 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 CRISPLD2Q9H0B8 497 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 SH2D4AQ9H788 454 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 ZNF112Q9UJU3 913 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 ZBTB21Q9ULJ3 1066 aa8.78□□□□□ -1
APOBEC3A-203ENST00000488758 WDR33Q9C0J8 1336 aaKnown RBP8.78□□□□□ -1
APOBEC3A-203ENST00000488758 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 KLRF2D3W0D1 207 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 F5H6K3 240 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 STX6O43752 255 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 GOLGA8HP0CJ92 632 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 SYT1P21579 422 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 INPP5BP32019 993 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 JAG1P78504 1218 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 MAP3K9P80192 1104 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 FOXK1P85037 733 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 KLRC3Q07444 240 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 TTLL12Q14166 644 aaPredicted RBP8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 NTRK3Q16288 839 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 SLFN13Q68D06 897 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 USP17L2Q6R6M4 530 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 TMTC3Q6ZXV5 915 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 CMTR1Q8N1G2 835 aaKnown RBP8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 SRBD1Q8N5C6 995 aaKnown RBP8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 PHKBQ93100 1093 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 CDCA5Q96FF9 252 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 WRNIP1Q96S55 665 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 PICK1Q9NRD5 415 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 MAD2L2Q9UI95 211 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 ISY1Q9ULR0 285 aaKnown RBP8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 SYNPO2Q9UMS6 1093 aa8.77□□□□□ -1.01
APOBEC3A-203ENST00000488758 VPS37CA5D8V6 355 aaPredicted RBP8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 PALM3A6NDB9 673 aaPredicted RBP8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 PRPF3O43395 683 aaKnown RBP8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 USP2O75604 605 aaPredicted RBP8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 PLEKHA8P1O95397 391 aa8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 DEXIO95424 95 aa8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 PDHBP11177 359 aa8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 FDPSP14324 419 aaKnown RBP8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 SMARCA1P28370 1054 aa8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 SLC1A4P43007 532 aa8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 IREB2P48200 963 aaKnown RBP8.76□□□□□ -1.01
APOBEC3A-203ENST00000488758 FOSBP53539 338 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms