RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 C16orf86Q6ZW13 317 aa22.94■■□□□ 1.26
GGPS1-206ENST00000488594 MMP19Q99542 508 aa22.94■■□□□ 1.26
GGPS1-206ENST00000488594 PDLIM7Q9NR12 457 aa22.94■■□□□ 1.26
GGPS1-206ENST00000488594 DIS3Q9Y2L1 958 aaKnown RBP22.94■■□□□ 1.26
GGPS1-206ENST00000488594 DNAH12Q6ZR08 3092 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 LTBP2Q14767 1821 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 USP17L12C9JPN9 530 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 USP17L21D6R901 530 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 ATP5JP18859 108 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 KCTD2Q14681 263 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 SAMD1Q6SPF0 538 aaPredicted RBP22.93■■□□□ 1.26
GGPS1-206ENST00000488594 RIOX2Q8IUF8 465 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 BADQ92934 168 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 FAM161BQ96MY7 647 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 HAUS7Q99871 368 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 BOLA2Q9H3K6 86 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 GOPCQ9HD26 462 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 XPNPEP3Q9NQH7 507 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 PHF24Q9UPV7 400 aa22.93■■□□□ 1.26
GGPS1-206ENST00000488594 ROBO3Q96MS0 1386 aa22.92■■□□□ 1.26
GGPS1-206ENST00000488594 EEF2P13639 858 aaKnown RBP22.92■■□□□ 1.26
GGPS1-206ENST00000488594 UBE3CQ15386 1083 aa22.92■■□□□ 1.26
GGPS1-206ENST00000488594 RNF180Q86T96 592 aa22.92■■□□□ 1.26
GGPS1-206ENST00000488594 FERMT2Q96AC1 680 aa22.92■■□□□ 1.26
GGPS1-206ENST00000488594 DDX19BQ9UMR2 479 aa22.92■■□□□ 1.26
GGPS1-206ENST00000488594 SMAD3P84022 425 aaKnown RBP22.91■■□□□ 1.26
GGPS1-206ENST00000488594 C9orf50Q5SZB4 431 aa22.91■■□□□ 1.26
GGPS1-206ENST00000488594 TINF2Q9BSI4 451 aa22.91■■□□□ 1.26
GGPS1-206ENST00000488594 PPP1R9AQ9ULJ8 1098 aa22.91■■□□□ 1.26
GGPS1-206ENST00000488594 TACC3Q9Y6A5 838 aa22.91■■□□□ 1.26
GGPS1-206ENST00000488594 VWA5AO00534 786 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 STAT3P40763 770 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 ZSCAN25Q6NSZ9 544 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 COL25A1Q9BXS0 654 aaPredicted RBP22.9■■□□□ 1.26
GGPS1-206ENST00000488594 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 CHMP4BQ9H444 224 aaKnown RBP22.9■■□□□ 1.26
GGPS1-206ENST00000488594 ZBTB40Q9NUA8 1239 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 SLC4A4Q9Y6R1 1079 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
GGPS1-206ENST00000488594 CYP2D7A0A087X1C5 515 aa22.89■■□□□ 1.26
GGPS1-206ENST00000488594 TRIM43BA6NCK2 446 aa22.89■■□□□ 1.26
GGPS1-206ENST00000488594 PGK2P07205 417 aa22.89■■□□□ 1.26
GGPS1-206ENST00000488594 TLE2Q04725 743 aa22.89■■□□□ 1.26
GGPS1-206ENST00000488594 ZNF792Q3KQV3 632 aa22.89■■□□□ 1.26
GGPS1-206ENST00000488594 SLFNL1Q499Z3 407 aa22.89■■□□□ 1.26
GGPS1-206ENST00000488594 TRIM43Q96BQ3 446 aaPredicted RBP22.89■■□□□ 1.26
GGPS1-206ENST00000488594 CDX2Q99626 313 aaPredicted RBP22.89■■□□□ 1.26
GGPS1-206ENST00000488594 FBXO28Q9NVF7 368 aa22.89■■□□□ 1.26
GGPS1-206ENST00000488594 CLTBP09497 229 aa22.89■■□□□ 1.25
GGPS1-206ENST00000488594 AKR1A1P14550 325 aa22.89■■□□□ 1.25
GGPS1-206ENST00000488594 SH3RF1Q7Z6J0 888 aa22.89■■□□□ 1.25
GGPS1-206ENST00000488594 MSL3Q8N5Y2 521 aaKnown RBP22.89■■□□□ 1.25
GGPS1-206ENST00000488594 SEMA6BQ9H3T3 888 aa22.89■■□□□ 1.25
GGPS1-206ENST00000488594 ARPP21Q9UBL0 812 aaPredicted RBP22.89■■□□□ 1.25
GGPS1-206ENST00000488594 ZNF214Q9UL59 606 aaPredicted RBP22.89■■□□□ 1.25
GGPS1-206ENST00000488594 CNPY2Q9Y2B0 182 aa22.89■■□□□ 1.25
GGPS1-206ENST00000488594 SMIM22K7EJ46 135 aa22.88■■□□□ 1.25
GGPS1-206ENST00000488594 CTR9Q6PD62 1173 aa22.88■■□□□ 1.25
GGPS1-206ENST00000488594 MYH8P13535 1937 aa22.87■■□□□ 1.25
GGPS1-206ENST00000488594 PGK1P00558 417 aa22.87■■□□□ 1.25
GGPS1-206ENST00000488594 FAM83BQ5T0W9 1011 aa22.87■■□□□ 1.25
GGPS1-206ENST00000488594 REPS2Q8NFH8 660 aa22.87■■□□□ 1.25
GGPS1-206ENST00000488594 KIAA0355O15063 1070 aa22.86■■□□□ 1.25
GGPS1-206ENST00000488594 RAD21O60216 631 aa22.86■■□□□ 1.25
GGPS1-206ENST00000488594 ZNF865P0CJ78 1059 aaPredicted RBP22.86■■□□□ 1.25
GGPS1-206ENST00000488594 TSEN34Q9BSV6 310 aaKnown RBP22.86■■□□□ 1.25
GGPS1-206ENST00000488594 TEX13BQ9BXU2 312 aa22.86■■□□□ 1.25
GGPS1-206ENST00000488594 COG6Q9Y2V7 657 aa22.86■■□□□ 1.25
GGPS1-206ENST00000488594 PARP14Q460N5 1801 aa22.86■■□□□ 1.25
GGPS1-206ENST00000488594 UNC80Q8N2C7 3258 aa22.85■■□□□ 1.25
GGPS1-206ENST00000488594 TMEM265A0A087WTH1 108 aa22.85■■□□□ 1.25
GGPS1-206ENST00000488594 A0A1W2PQ45 241 aaPredicted RBP22.85■■□□□ 1.25
GGPS1-206ENST00000488594 A0A1W2PQY0 241 aa22.85■■□□□ 1.25
GGPS1-206ENST00000488594 MAFAQ8NHW3 353 aaPredicted RBP22.85■■□□□ 1.25
GGPS1-206ENST00000488594 SLF1Q9BQI6 1058 aa22.85■■□□□ 1.25
GGPS1-206ENST00000488594 LAMA2P24043 3122 aaKnown RBP22.84■■□□□ 1.25
GGPS1-206ENST00000488594 BAZ2AQ9UIF9 1905 aaKnown RBP22.84■■□□□ 1.25
GGPS1-206ENST00000488594 RAG1P15918 1043 aa22.84■■□□□ 1.25
GGPS1-206ENST00000488594 TAL1P17542 331 aaPredicted RBP22.84■■□□□ 1.25
GGPS1-206ENST00000488594 NUP133Q8WUM0 1156 aa22.84■■□□□ 1.25
GGPS1-206ENST00000488594 RNPC3Q96LT9 517 aaKnown RBP22.84■■□□□ 1.25
GGPS1-206ENST00000488594 TOX2Q96NM4 488 aa22.84■■□□□ 1.25
GGPS1-206ENST00000488594 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.84■■□□□ 1.25
GGPS1-206ENST00000488594 PUS7LQ9H0K6 701 aaKnown RBP22.84■■□□□ 1.25
GGPS1-206ENST00000488594 SYNGAP1Q96PV0 1343 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 PQBP1O60828 265 aaKnown RBP22.83■■□□□ 1.25
GGPS1-206ENST00000488594 ADAMTS4O75173 837 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 CHGBP05060 677 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 ITGB8P26012 769 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 SBK1Q52WX2 424 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 GIMAP6Q6P9H5 292 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 ANKRD33Q7Z3H0 272 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 DDX11Q96FC9 970 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 LRRCC1Q9C099 1032 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 TTYH1Q9H313 450 aaPredicted RBP22.83■■□□□ 1.25
GGPS1-206ENST00000488594 NYAP2Q9P242 653 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 FAM184BQ9ULE4 1060 aa22.83■■□□□ 1.25
GGPS1-206ENST00000488594 MOXD2PA6NHM9 499 aa22.82■■□□□ 1.24
GGPS1-206ENST00000488594 FPGSQ05932 587 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms