RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ITGB1BP2Q9UKP3 347 aa7.09□□□□□ -1.27
SIK3-212ENST00000488337 PPP2R2CQ9Y2T4 447 aa7.09□□□□□ -1.27
SIK3-212ENST00000488337 USP32Q8NFA0 1604 aa7.09□□□□□ -1.27
SIK3-212ENST00000488337 TMEM247A6NEH6 219 aa7.09□□□□□ -1.28
SIK3-212ENST00000488337 GOLGA6L9A6NEM1 432 aa7.09□□□□□ -1.28
SIK3-212ENST00000488337 SURF6O75683 361 aaKnown RBP7.09□□□□□ -1.28
SIK3-212ENST00000488337 GHRP10912 638 aa7.09□□□□□ -1.28
SIK3-212ENST00000488337 RSPH1Q8WYR4 309 aa7.09□□□□□ -1.28
SIK3-212ENST00000488337 TRAPPC9Q96Q05 1148 aa7.09□□□□□ -1.28
SIK3-212ENST00000488337 MOV10L1Q9BXT6 1211 aaKnown RBP7.09□□□□□ -1.28
SIK3-212ENST00000488337 CDC23Q9UJX2 597 aa7.09□□□□□ -1.28
SIK3-212ENST00000488337 DEPDC5O75140 1603 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 EVI5O60447 810 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 UBTFL1P0CB47 393 aaPredicted RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 MYCLP1P12525 358 aaPredicted RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 SFPQP23246 707 aaKnown RBP eCLIP7.08□□□□□ -1.28
SIK3-212ENST00000488337 TCF7P36402 384 aaPredicted RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 SCTRP47872 440 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 ZNF268Q14587 947 aaPredicted RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 HOMER1Q86YM7 354 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 CCAR1Q8IX12 1150 aaKnown RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 SNX27Q96L92 541 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 TANGO6Q9C0B7 1094 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 HSD3B7Q9H2F3 369 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 HSFX1Q9UBD0 423 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 GOLGA8AA7E2F4 631 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 PFKFB2O60825 505 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 MCM3P25205 808 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 GNL2Q13823 731 aaKnown RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 RNF25Q96BH1 459 aaPredicted RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 NUDT16Q96DE0 195 aaKnown RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 NDNQ99608 321 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 SYT15Q9BQS2 421 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 RIMS2Q9UQ26 1411 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 C5orf60A6NFR6 353 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 CHL1O00533 1208 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 NDUFAB1O14561 156 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 CEP104O60308 925 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 NR1I2O75469 434 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 IBSPP21815 317 aaPredicted RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 CD97P48960 835 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 PI16Q6UXB8 463 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 CNBD1Q8NA66 436 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 RABL2AQ9UBK7 228 aaPredicted RBP7.08□□□□□ -1.28
SIK3-212ENST00000488337 LRRC42Q9Y546 428 aa7.08□□□□□ -1.28
SIK3-212ENST00000488337 MYH7P12883 1935 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 CCDC175P0C221 793 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 STAT6P42226 847 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 LONRF3Q496Y0 759 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 ZMYM1Q5SVZ6 1142 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 HVCN1Q96D96 273 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 OSBPL1AQ9BXW6 950 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.07□□□□□ -1.28
SIK3-212ENST00000488337 SLC30A1Q9Y6M5 507 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 KIDINS220Q9ULH0 1771 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 GOLGA6L7A0A1B0GV03 622 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 WASLO00401 505 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 N4BP3O15049 544 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 BUB1BO60566 1050 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 TMCC1O94876 653 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 FAM107AO95990 144 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 ZFXP17010 805 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 EIF2S2P20042 333 aaKnown RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 LSP1P33241 339 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 ESCO1Q5FWF5 840 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 FBXO31Q5XUX0 539 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 DUS1LQ6P1R4 473 aaKnown RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 C3orf62Q6ZUJ4 267 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 CCDC65Q8IXS2 484 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.07□□□□□ -1.28
SIK3-212ENST00000488337 MYCBPAPQ8TBZ2 947 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 RUFY2Q8WXA3 655 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 CCT6BQ92526 530 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 P3H4Q92791 437 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 OSBPL3Q9H4L5 887 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 MKS1Q9NXB0 559 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 PUF60Q9UHX1 559 aaKnown RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 ATP10DQ9P241 1426 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 QRICH2Q9H0J4 1663 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 MAP4K4O95819 1239 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 ZKSCAN1P17029 563 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 FXNQ16595 210 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 STX1AQ16623 288 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 SKIDA1Q1XH10 827 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 TTMPQ5BVD1 217 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 DAB2IPQ5VWQ8 1189 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 NEPROQ6NW34 567 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 KDM7AQ6ZMT4 941 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 CEP57L1Q8IYX8 460 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 SLC7A5P1Q8MH63 180 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 CNTROBQ8N137 903 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 TRIM11Q96F44 468 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 PGBD1Q96JS3 809 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 TUBA8Q9NY65 449 aaPredicted RBP7.07□□□□□ -1.28
SIK3-212ENST00000488337 LIMCH1Q9UPQ0 1083 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 NEURL4Q96JN8 1562 aa7.07□□□□□ -1.28
SIK3-212ENST00000488337 NEDD4P46934 1319 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms