RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 RECKO95980 971 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 GNAI3P08754 354 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 CHMLP26374 656 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 HNRNPMP52272 730 aaKnown RBP eCLIP5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 EVCP57679 992 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 APOBRQ0VD83 1088 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 MRPL58Q14197 206 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 MAP9Q49MG5 647 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 LRCH2Q5VUJ6 765 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 FCHSD1Q86WN1 690 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 PIK3R5Q8WYR1 880 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 SGSM3Q96HU1 749 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 DUSP9Q99956 384 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 UPF3BQ9BZI7 483 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 SCAND2PQ9GZW5 306 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 DNAJC25Q9H1X3 360 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 TRMT1Q9NXH9 659 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 DACT1Q9NYF0 836 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 ANKIB1Q9P2G1 1089 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 LIMCH1Q9UPQ0 1083 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 SMC3Q9UQE7 1217 aa5.47□□□□□ -1.53
CDC42BPA-213ENST00000488131 ADGRB3O60242 1522 aa5.46□□□□□ -1.53
CDC42BPA-213ENST00000488131 ARHGEF28Q8N1W1 1705 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-213ENST00000488131 PNMA6FA0A0J9YX94 578 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 GOLGA6L19H0YKK7 550 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 GOLIM4O00461 696 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 NPHP1O15259 732 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 SMC2O95347 1197 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 VAMP1P23763 118 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 ARSDP51689 593 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 SNRPNP63162 240 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 UBAP2LQ14157 1087 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 GRIN2CQ14957 1233 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 STX1AQ16623 288 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 HIF1AQ16665 826 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 LONRF2Q1L5Z9 754 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 DNAJC21Q5F1R6 531 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 EFHC2Q5JST6 749 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 USPL1Q5W0Q7 1092 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 KCNV1Q6PIU1 500 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 TRIM65Q6PJ69 517 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 LRRC31Q6UY01 552 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 RUFY3Q7L099 469 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 CMTR1Q8N1G2 835 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 MPHOSPH8Q99549 860 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 SH2B1Q9NRF2 756 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 PDRG1Q9NUG6 133 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 STAP2Q9UGK3 403 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 PARP2Q9UGN5 583 aa5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 FOXD3Q9UJU5 478 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDC42BPA-213ENST00000488131 CD163L1Q9NR16 1453 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 ADCY9O60503 1353 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 KIF20BQ96Q89 1820 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 EIF1AYO14602 144 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 GNB5O14775 395 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 FANCGO15287 622 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CTAGE5O15320 804 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 COBLO75128 1261 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 EIF3JO75822 258 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 BMP4P12644 408 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 DDR1Q08345 913 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CCDC30Q5VVM6 783 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 NOL8Q76FK4 1167 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CKAP2LQ8IYA6 745 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 FAM71BQ8TC56 605 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 DNAAF4Q8WXU2 420 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 KAT2BQ92831 832 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CCDC34Q96HJ3 373 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 ZSCAN31Q96LW9 406 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CSRNP1Q96S65 589 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 KRTAP17-1Q9BYP8 105 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 ATXN7L1Q9ULK2 861 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 TRAK1Q9UPV9 953 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 AKAP2Q9Y2D5 859 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 USP16Q9Y5T5 823 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 PPLO60437 1756 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CLTCQ00610 1675 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 PLEKHD1A6NEE1 506 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 TMCO5BA8MYB1 307 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 NRDCO43847 1150 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 HMMRO75330 724 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 TNFRSF21O75509 655 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 COL8A1P27658 744 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 GJB2P29033 226 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 HNRNPH1P31943 449 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 AK2P54819 239 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 GNAI1P63096 354 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 IRX1P78414 480 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CAMK4Q16566 473 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 NBPF9Q3BBW0 867 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 VPS53Q5VIR6 699 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 ARMCX5Q6P1M9 558 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 XKR5Q6UX68 686 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 DHX40Q8IX18 779 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 FAXDC2Q96IV6 333 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CEP63Q96MT8 703 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 CARD6Q9BX69 1037 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 NEUROD4Q9HD90 331 aa5.45□□□□□ -1.54
CDC42BPA-213ENST00000488131 GNL3LQ9NVN8 582 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms