RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 Q96M66 194 aa4.76□□□□□ -1.65
R3HDM1-219ENST00000488035 TEPSINQ96N21 525 aa4.76□□□□□ -1.65
R3HDM1-219ENST00000488035 SIRT5Q9NXA8 310 aa4.76□□□□□ -1.65
R3HDM1-219ENST00000488035 LMNB1P20700 586 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 RACK1P63244 317 aaKnown RBP4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 SRSF3P84103 164 aaKnown RBP4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 OLFML2BQ68BL8 750 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 ERMP1Q7Z2K6 904 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 RNF34Q969K3 372 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 BCL11AQ9H165 835 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 METTL5Q9NRN9 209 aaKnown RBP4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 CEP131Q9UPN4 1083 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 TLR6Q9Y2C9 796 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 PCDHA11Q9Y5I1 949 aa4.75□□□□□ -1.65
R3HDM1-219ENST00000488035 ZC3H12DA2A288 527 aaKnown RBP4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 SLC22A31A6NKX4 558 aa4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 SV2BQ7L1I2 683 aa4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 GAL3ST3Q96A11 431 aa4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 TMEM87BQ96K49 555 aa4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 NOC4LQ9BVI4 516 aaKnown RBP4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 KBTBD4Q9NVX7 518 aa4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 TJP2Q9UDY2 1190 aa4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 MBD1Q9UIS9 605 aaPredicted RBP4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 GGT7Q9UJ14 662 aa4.74□□□□□ -1.65
R3HDM1-219ENST00000488035 GFRA2O00451 464 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 N4BP3O15049 544 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 PGRP06401 933 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 ITGAEP38570 1179 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 LIG3P49916 1009 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 PDE4BQ07343 736 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 ADGRF1Q5T601 910 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 HS2ST1Q7LGA3 356 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 DTWD2Q8NBA8 298 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 DNAJB8Q8NHS0 232 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 FEZF2Q8TBJ5 459 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 PANK1Q8TE04 598 aa4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 DPH2Q9BQC3 489 aaPredicted RBP4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 LUC7LQ9NQ29 371 aaKnown RBP4.73□□□□□ -1.65
R3HDM1-219ENST00000488035 TFE3P19532 575 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 ERCC5P28715 1186 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 TNNI2P48788 182 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 RPS26P62854 115 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 TTBK2Q6IQ55 1244 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 FRMD5Q7Z6J6 570 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 USP48Q86UV5 1035 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 MCATQ8IVS2 390 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 ZDHHC14Q8IZN3 488 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 PHC3Q8NDX5 983 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 SHISA4Q96DD7 197 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 RHOVQ96L33 236 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 ACBD3Q9H3P7 528 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 CRTAC1Q9NQ79 661 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 DDX41Q9UJV9 622 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 MYRFQ9Y2G1 1151 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 PCDHB5Q9Y5E4 795 aa4.72□□□□□ -1.65
R3HDM1-219ENST00000488035 MINDY4BA8MYZ0 360 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 ABLIM1O14639 778 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 SUV39H1O43463 412 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 GARTP22102 1010 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 RANGAP1P46060 587 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 CDK8P49336 464 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 PLP2Q04941 152 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 FAM160A1Q05DH4 1040 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 DIEXFQ68CQ4 756 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 CNKSR3Q6P9H4 555 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 NLRX1Q86UT6 975 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 LINC01599Q8WXQ3 324 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 RSRP1Q9BUV0 290 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 ADAMTS1Q9UHI8 967 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 ADAM30Q9UKF2 790 aa4.71□□□□□ -1.66
R3HDM1-219ENST00000488035 PF4P02776 101 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 GBP2P32456 591 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 TEKQ02763 1124 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 SEPT6Q14141 434 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 SLC14A2Q15849 920 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 AGMOQ6ZNB7 445 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 CYB5D2Q8WUJ1 264 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 RNF141Q8WVD5 230 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 TMEM74Q96NL1 305 aa4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 CNOT11Q9UKZ1 510 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-219ENST00000488035 IRS4O14654 1257 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 VIPR1P32241 457 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 EPHB3P54753 998 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 YBX1P67809 324 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 CAMK2GQ13555 558 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 CLEC16AQ2KHT3 1053 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 FBXL19Q6PCT2 694 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 BNC2Q6ZN30 1099 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 SIRT2Q8IXJ6 389 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 LINC01356Q8N9X3 169 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 MZB1Q8WU39 189 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 GPR20Q99678 358 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 TINF2Q9BSI4 451 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 TGIF2Q9GZN2 237 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 CNTD2Q9H8S5 307 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 EBF1Q9UH73 591 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 PALD1Q9ULE6 856 aa4.69□□□□□ -1.66
R3HDM1-219ENST00000488035 NRDCO43847 1150 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms