RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 UBAC1Q9BSL1 405 aa11.03□□□□□ -0.64
LCN2-205ENST00000487719 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
LCN2-205ENST00000487719 CENPFP49454 3210 aa11.03□□□□□ -0.64
LCN2-205ENST00000487719 IGKV6D-41A0A0C4DH26 115 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 ERICH2A1L162 156 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 SGSM2O43147 1006 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 CDC45O75419 566 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 NDUFB10O96000 172 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 FGRP09769 529 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 FDX1P10109 184 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 GRK4P32298 578 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 DSG3P32926 999 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 SLC1A4P43007 532 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 PRKCZQ05513 592 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.65
LCN2-205ENST00000487719 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 SLFN13Q68D06 897 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 PLEKHH3Q7Z736 793 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.65
LCN2-205ENST00000487719 CHURC1Q8WUH1 139 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 TTC14Q96N46 770 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.65
LCN2-205ENST00000487719 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 FEM1BQ9UK73 627 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 ZNF236Q9UL36 1845 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 PDE4DIPQ5VU43 2346 aa11.02□□□□□ -0.65
LCN2-205ENST00000487719 ZBED4O75132 1171 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 SLC25A27O95847 323 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
LCN2-205ENST00000487719 BMP3P12645 472 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 RGS2P41220 211 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 FLT3LGP49771 235 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 STAT2P52630 851 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 IRF5Q13568 498 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 CCDC96Q2M329 555 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 FAM160B2Q86V87 743 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 SIAH1Q8IUQ4 282 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 TBC1D10CQ8IV04 446 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 PRPF38AQ8NAV1 312 aaKnown RBP11.01□□□□□ -0.65
LCN2-205ENST00000487719 GMCL1Q96IK5 515 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 TXNRD2Q9NNW7 524 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 ANO2Q9NQ90 1003 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 RBPJLQ9UBG7 517 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 PPP1R9AQ9ULJ8 1098 aa11.01□□□□□ -0.65
LCN2-205ENST00000487719 MCM3APO60318 1980 aa11□□□□□ -0.65
LCN2-205ENST00000487719 STRNO43815 780 aa11□□□□□ -0.65
LCN2-205ENST00000487719 ADCY3O60266 1144 aa11□□□□□ -0.65
LCN2-205ENST00000487719 KDM4AO75164 1064 aa11□□□□□ -0.65
LCN2-205ENST00000487719 GPR142Q7Z601 462 aa11□□□□□ -0.65
LCN2-205ENST00000487719 NCAPG2Q86XI2 1143 aa11□□□□□ -0.65
LCN2-205ENST00000487719 SHCBP1Q8NEM2 672 aa11□□□□□ -0.65
LCN2-205ENST00000487719 NCOA7Q8NI08 942 aa11□□□□□ -0.65
LCN2-205ENST00000487719 PXYLP1Q8TE99 480 aa11□□□□□ -0.65
LCN2-205ENST00000487719 DCAF4Q8WV16 495 aa11□□□□□ -0.65
LCN2-205ENST00000487719 ARMC5Q96C12 935 aa11□□□□□ -0.65
LCN2-205ENST00000487719 ATG4CQ96DT6 458 aa11□□□□□ -0.65
LCN2-205ENST00000487719 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
LCN2-205ENST00000487719 SPATC1LQ9H0A9 340 aa11□□□□□ -0.65
LCN2-205ENST00000487719 MROH8Q9H579 483 aa11□□□□□ -0.65
LCN2-205ENST00000487719 KAT14Q9H8E8 782 aa11□□□□□ -0.65
LCN2-205ENST00000487719 MTMR7Q9Y216 660 aa11□□□□□ -0.65
LCN2-205ENST00000487719 NEDD4P46934 1319 aa11□□□□□ -0.65
LCN2-205ENST00000487719 BAZ2BQ9UIF8 2168 aaKnown RBP10.99□□□□□ -0.65
LCN2-205ENST00000487719 SLC15A5A6NIM6 579 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 B4E1Z4 1266 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 VWA5AO00534 786 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 NMT2O60551 498 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 MCCP23508 829 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 RCSD1Q6JBY9 416 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 DGKHQ86XP1 1220 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 NUP88Q99567 741 aaPredicted RBP10.99□□□□□ -0.65
LCN2-205ENST00000487719 APBA2Q99767 749 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 TEX13BQ9BXU2 312 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 INCENPQ9NQS7 918 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 PNMA2Q9UL42 364 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 HTTP42858 3142 aa10.99□□□□□ -0.65
LCN2-205ENST00000487719 SMCHD1A6NHR9 2005 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
LCN2-205ENST00000487719 REC8O95072 547 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 HMGCRP04035 888 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 FCER1AP12319 257 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 XRCC5P13010 732 aaKnown RBP10.98□□□□□ -0.65
LCN2-205ENST00000487719 ZKSCAN1P17029 563 aaPredicted RBP10.98□□□□□ -0.65
LCN2-205ENST00000487719 CYP2B6P20813 491 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 CTGFP29279 349 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 STAT3P40763 770 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 KCTD2Q14681 263 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 Q3C1V9 767 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 IFIT1BQ5T764 474 aaKnown RBP10.98□□□□□ -0.65
LCN2-205ENST00000487719 DPP9Q86TI2 863 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 NKX2-3Q8TAU0 364 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 SH3TC2Q8TF17 1288 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 MAP4K1Q92918 833 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 ZNF333Q96JL9 665 aa10.98□□□□□ -0.65
LCN2-205ENST00000487719 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
LCN2-205ENST00000487719 TMEM47Q9BQJ4 181 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms