RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SLC15A5A6NIM6 579 aa24.25■■□□□ 1.47
HDAC4-209ENST00000487617 NDUFB10O96000 172 aa24.25■■□□□ 1.47
HDAC4-209ENST00000487617 TRIM32Q13049 653 aa24.25■■□□□ 1.47
HDAC4-209ENST00000487617 MAP2K5Q13163 448 aa24.25■■□□□ 1.47
HDAC4-209ENST00000487617 CWC27Q6UX04 472 aaKnown RBP24.25■■□□□ 1.47
HDAC4-209ENST00000487617 TRMT44Q8IYL2 757 aaKnown RBP24.25■■□□□ 1.47
HDAC4-209ENST00000487617 MKL1Q969V6 931 aa24.25■■□□□ 1.47
HDAC4-209ENST00000487617 APBA2Q99767 749 aa24.25■■□□□ 1.47
HDAC4-209ENST00000487617 TSPY2A6NKD2 308 aa24.24■■□□□ 1.47
HDAC4-209ENST00000487617 HIP1O00291 1037 aa24.24■■□□□ 1.47
HDAC4-209ENST00000487617 ZKSCAN1P17029 563 aaPredicted RBP24.24■■□□□ 1.47
HDAC4-209ENST00000487617 LRRC47Q8N1G4 583 aaKnown RBP24.24■■□□□ 1.47
HDAC4-209ENST00000487617 DEFB118Q96PH6 123 aa24.24■■□□□ 1.47
HDAC4-209ENST00000487617 PPP1R9AQ9ULJ8 1098 aa24.24■■□□□ 1.47
HDAC4-209ENST00000487617 PLXNB2O15031 1838 aa24.24■■□□□ 1.47
HDAC4-209ENST00000487617 RANBP6O60518 1105 aaKnown RBP24.23■■□□□ 1.47
HDAC4-209ENST00000487617 SGPL1O95470 568 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 ERCC3P19447 782 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 CCL14Q16627 93 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 SHCBP1Q8NEM2 672 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.23■■□□□ 1.475e-6■■■■□ 22.5
HDAC4-209ENST00000487617 PAK6Q9NQU5 681 aaPredicted RBP24.23■■□□□ 1.47
HDAC4-209ENST00000487617 TOMM22Q9NS69 142 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 SYNPO2Q9UMS6 1093 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 ADAMTS5Q9UNA0 930 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 TACC3Q9Y6A5 838 aa24.23■■□□□ 1.47
HDAC4-209ENST00000487617 ZMYM6O95789 1325 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 RPTORQ8N122 1335 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 GRB14Q14449 540 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 TMEM132BQ14DG7 1078 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 PPP4R3BQ5MIZ7 849 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 TTC22Q5TAA0 569 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 NCAPG2Q86XI2 1143 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 SLF1Q9BQI6 1058 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 HMX1Q9NP08 348 aaPredicted RBP24.22■■□□□ 1.47
HDAC4-209ENST00000487617 RLFQ13129 1914 aa24.22■■□□□ 1.47
HDAC4-209ENST00000487617 VWA5AO00534 786 aa24.21■■□□□ 1.47
HDAC4-209ENST00000487617 ORC4O43929 436 aa24.21■■□□□ 1.47
HDAC4-209ENST00000487617 TFRCP02786 760 aaKnown RBP24.21■■□□□ 1.47
HDAC4-209ENST00000487617 HAND2P61296 217 aa24.21■■□□□ 1.47
HDAC4-209ENST00000487617 RRP12Q5JTH9 1297 aaKnown RBP24.21■■□□□ 1.47
HDAC4-209ENST00000487617 GMCL1P1Q8NEA9 526 aa24.21■■□□□ 1.47
HDAC4-209ENST00000487617 MROH8Q9H579 483 aa24.21■■□□□ 1.47
HDAC4-209ENST00000487617 STRNO43815 780 aa24.2■■□□□ 1.46
HDAC4-209ENST00000487617 FGRP09769 529 aa24.2■■□□□ 1.46
HDAC4-209ENST00000487617 PRKAR2AP13861 404 aaKnown RBP24.2■■□□□ 1.46
HDAC4-209ENST00000487617 SLFN13Q68D06 897 aa24.2■■□□□ 1.46
HDAC4-209ENST00000487617 A0A0G2JMZ2 1700 aa24.2■■□□□ 1.46
HDAC4-209ENST00000487617 NMT2O60551 498 aa24.19■■□□□ 1.46
HDAC4-209ENST00000487617 SLC25A27O95847 323 aa24.19■■□□□ 1.46
HDAC4-209ENST00000487617 GSPT1P15170 499 aaKnown RBP24.19■■□□□ 1.46
HDAC4-209ENST00000487617 MAP3K21Q5TCX8 1036 aa24.19■■□□□ 1.46
HDAC4-209ENST00000487617 DPP9Q86TI2 863 aa24.19■■□□□ 1.46
HDAC4-209ENST00000487617 IL17RBQ9NRM6 502 aa24.19■■□□□ 1.46
HDAC4-209ENST00000487617 STX8Q9UNK0 236 aa24.19■■□□□ 1.46
HDAC4-209ENST00000487617 BRCA2P51587 3418 aa24.19■■□□□ 1.46
HDAC4-209ENST00000487617 TNRC18O15417 2968 aaPredicted RBP24.18■■□□□ 1.46
HDAC4-209ENST00000487617 PDE4DIPQ5VU43 2346 aa24.18■■□□□ 1.46
HDAC4-209ENST00000487617 HOXC6P09630 235 aa24.18■■□□□ 1.46
HDAC4-209ENST00000487617 CAPN2P17655 700 aa24.18■■□□□ 1.46
HDAC4-209ENST00000487617 ADORA2AP29274 412 aa24.18■■□□□ 1.46
HDAC4-209ENST00000487617 STAT3P40763 770 aa24.18■■□□□ 1.46
HDAC4-209ENST00000487617 CACNB2Q08289 660 aaPredicted RBP24.18■■□□□ 1.46
HDAC4-209ENST00000487617 PRPF38BQ5VTL8 546 aaKnown RBP24.18■■□□□ 1.46
HDAC4-209ENST00000487617 MFSD14CQ5VZR4 134 aa24.18■■□□□ 1.46
HDAC4-209ENST00000487617 PRPF38AQ8NAV1 312 aaKnown RBP24.18■■□□□ 1.46
HDAC4-209ENST00000487617 NPLOC4Q8TAT6 608 aa24.18■■□□□ 1.46
HDAC4-209ENST00000487617 ISY1Q9ULR0 285 aaKnown RBP24.18■■□□□ 1.46
HDAC4-209ENST00000487617 FARP2O94887 1054 aaPredicted RBP24.17■■□□□ 1.46
HDAC4-209ENST00000487617 RIOX2Q8IUF8 465 aa24.17■■□□□ 1.46
HDAC4-209ENST00000487617 REPS2Q8NFH8 660 aa24.17■■□□□ 1.46
HDAC4-209ENST00000487617 CRISPLD2Q9H0B8 497 aa24.17■■□□□ 1.46
HDAC4-209ENST00000487617 FLRT1Q9NZU1 646 aa24.17■■□□□ 1.46
HDAC4-209ENST00000487617 FEM1BQ9UK73 627 aa24.17■■□□□ 1.46
HDAC4-209ENST00000487617 CTDP1Q9Y5B0 961 aaPredicted RBP24.17■■□□□ 1.46
HDAC4-209ENST00000487617 BMP3P12645 472 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 AKNAD1Q5T1N1 836 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 MFSD6Q6ZSS7 791 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 UBE2Q1Q7Z7E8 422 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 ABRAQ8N0Z2 381 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 KIFC2Q96AC6 838 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 CHMP4CQ96CF2 233 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 NBPF3Q9H094 633 aa24.16■■□□□ 1.46
HDAC4-209ENST00000487617 ZNF214Q9UL59 606 aaPredicted RBP24.16■■□□□ 1.46
HDAC4-209ENST00000487617 ZNF213O14771 459 aa24.15■■□□□ 1.46
HDAC4-209ENST00000487617 ZBED4O75132 1171 aa24.15■■□□□ 1.46
HDAC4-209ENST00000487617 PCP11498 1178 aaKnown RBP24.15■■□□□ 1.46
HDAC4-209ENST00000487617 FCER1AP12319 257 aa24.15■■□□□ 1.46
HDAC4-209ENST00000487617 TBC1D10CQ8IV04 446 aa24.15■■□□□ 1.46
HDAC4-209ENST00000487617 STAG1Q8WVM7 1258 aa24.15■■□□□ 1.46
HDAC4-209ENST00000487617 RNF41Q9H4P4 317 aaPredicted RBP24.15■■□□□ 1.46
HDAC4-209ENST00000487617 SLC5A4Q9NY91 659 aa24.15■■□□□ 1.46
HDAC4-209ENST00000487617 MYH4Q9Y623 1939 aa24.14■■□□□ 1.46
HDAC4-209ENST00000487617 COBLO75128 1261 aa24.14■■□□□ 1.45
HDAC4-209ENST00000487617 MCCP23508 829 aa24.14■■□□□ 1.45
HDAC4-209ENST00000487617 CCND3P30281 292 aaPredicted RBP24.14■■□□□ 1.45
HDAC4-209ENST00000487617 COPB2P35606 906 aa24.14■■□□□ 1.45
HDAC4-209ENST00000487617 SLC1A4P43007 532 aa24.14■■□□□ 1.45
HDAC4-209ENST00000487617 GMCL1Q96IK5 515 aa24.14■■□□□ 1.45
HDAC4-209ENST00000487617 MMP19Q99542 508 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms