RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ZAR1Q86SH2 424 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 ZSWIM2Q8NEG5 633 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 ADCY4Q8NFM4 1077 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 BRF1Q92994 677 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 HEXIM2Q96MH2 286 aaKnown RBP7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 PRDM14Q9GZV8 571 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 PRDM5Q9NQX1 630 aaPredicted RBP7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 WHRNQ9P202 907 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 ITGA4P13612 1032 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 ZNF445P59923 1031 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 NOL9Q5SY16 702 aaKnown RBP7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 FOXB2Q5VYV0 432 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 ZNF227Q86WZ6 799 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 BVESQ8NE79 360 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 Q96M66 194 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 PUS7Q96PZ0 661 aaKnown RBP7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 ARHGEF4Q9NR80 690 aa7.21□□□□□ -1.26
PRPF38A-203ENST00000487160 FAM170BA6NMN3 283 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 NCLP19338 710 aaKnown RBP7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 L1CAMP32004 1257 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 PPP2R2AP63151 447 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 HSP90AA2PQ14568 343 aaPredicted RBP7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 PRR23CQ6ZRP0 262 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 FBXL6Q8N531 539 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 COX4I2Q96KJ9 171 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 MFSD14AQ96MC6 490 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 GTF2IRD1Q9UHL9 959 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 AKT3Q9Y243 479 aa7.2□□□□□ -1.26
PRPF38A-203ENST00000487160 A0A087WZG4 1122 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 PRR33A8MZF0 331 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 NOP56O00567 594 aaKnown RBP7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 TBX1O43435 398 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 ASMTLO95671 621 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 TKFCQ3LXA3 575 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 CYP27C1Q4G0S4 372 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 TMEM67Q5HYA8 995 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 FAM209AQ5JX71 171 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 YOD1Q5VVQ6 348 aaPredicted RBP7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 ZNF765Q7L2R6 523 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 TMC3Q7Z5M5 1100 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 KIAA0907Q7Z7F0 614 aaPredicted RBP7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 ARHGEF39Q8N4T4 335 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 DTWD2Q8NBA8 298 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 RCC1LQ96I51 464 aaKnown RBP7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 MRGPRX3Q96LB0 322 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 SLC26A8Q96RN1 970 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 AARSD1Q9BTE6 412 aaKnown RBP7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 GFOD1Q9NXC2 390 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 KCNH3Q9ULD8 1083 aa7.19□□□□□ -1.26
PRPF38A-203ENST00000487160 TRAV20A0A0B4J274 112 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 PPP1R12AO14974 1030 aaPredicted RBP7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 CAPNS1P04632 268 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 GRIA2P42262 883 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 KIR3DL1P43629 444 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 GSK3AP49840 483 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 GYS2P54840 703 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 RASSF7Q02833 373 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 PPP2R5DQ14738 602 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 TCEA2Q15560 299 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 ZC3H12BQ5HYM0 836 aaKnown RBP7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 RNF43Q68DV7 783 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 GPAT2Q6NUI2 795 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 FIBCD1Q8N539 461 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 SYTL5Q8TDW5 730 aaPredicted RBP7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 EXOC2Q96KP1 924 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 NOL6Q9H6R4 1146 aaKnown RBP7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 TPSG1Q9NRR2 321 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 CGGBP1Q9UFW8 167 aaPredicted RBP7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 MINPP1Q9UNW1 487 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 DIS3Q9Y2L1 958 aaKnown RBP7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 EMC9Q9Y3B6 208 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 FHOD1Q9Y613 1164 aa7.18□□□□□ -1.26
PRPF38A-203ENST00000487160 IGF2BP3O00425 579 aaKnown RBP eCLIP7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 KCNH1O95259 989 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 F13BP05160 661 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 TNK2Q07912 1038 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 POMZP3Q6PJE2 187 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 TRIM59Q8IWR1 403 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 IPO9Q96P70 1041 aaKnown RBP7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 FEZ1Q99689 392 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 CDC6Q99741 560 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 DHRS4Q9BTZ2 278 aa7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 SLKQ9H2G2 1235 aaPredicted RBP7.17□□□□□ -1.26
PRPF38A-203ENST00000487160 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 SHISA3A0PJX4 238 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 MEIS1O00470 390 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 PRODHO43272 600 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 SIGLEC6O43699 453 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 VAMP4O75379 141 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 PRAMEF1O95521 474 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 ZNF865P0CJ78 1059 aaPredicted RBP7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 CYP27A1Q02318 531 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 KCNMA1Q12791 1236 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 NMIQ13287 307 aaPredicted RBP7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 C21orf62-AS1Q17RA5 79 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 DUSP27Q5VZP5 1158 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 C22orf34Q6ZV56 151 aa7.16□□□□□ -1.26
PRPF38A-203ENST00000487160 CRACR2BQ8N4Y2 399 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms