RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 LRRC24Q50LG9 513 aa10.36□□□□□ -0.75
APTX-228ENST00000486724 IER5LQ5T953 404 aa10.36□□□□□ -0.75
APTX-228ENST00000486724 ZGPATQ8N5A5 531 aaKnown RBP10.36□□□□□ -0.75
APTX-228ENST00000486724 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.36□□□□□ -0.75
APTX-228ENST00000486724 MAML3Q96JK9 1138 aa10.36□□□□□ -0.75
APTX-228ENST00000486724 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
APTX-228ENST00000486724 IPO9Q96P70 1041 aaKnown RBP10.36□□□□□ -0.75
APTX-228ENST00000486724 SYNRGQ9UMZ2 1314 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 SMCHD1A6NHR9 2005 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.35□□□□□ -0.75
APTX-228ENST00000486724 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 COBLO75128 1261 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 RGS20O76081 388 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 ATXN8OSP0DMR3 200 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 AKR1A1P14550 325 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 ID4P47928 161 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 RRP1P56182 461 aaKnown RBP10.35□□□□□ -0.75
APTX-228ENST00000486724 TAP1Q03518 808 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 FAM126BQ8IXS8 530 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 FAM163AQ96GL9 167 aaPredicted RBP10.35□□□□□ -0.75
APTX-228ENST00000486724 C12orf42Q96LP6 360 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 IRF2BPLQ9H1B7 796 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 GINM1Q9NU53 330 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 FAM86C1Q9NVL1 165 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 GNL3LQ9NVN8 582 aaKnown RBP10.35□□□□□ -0.75
APTX-228ENST00000486724 LMCD1Q9NZU5 365 aa10.35□□□□□ -0.75
APTX-228ENST00000486724 ZBTB47Q9UFB7 747 aaPredicted RBP10.35□□□□□ -0.75
APTX-228ENST00000486724 MROH7-TTC4A0A0A0MT08 1334 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 A0A0U1RQG5 324 aaPredicted RBP10.34□□□□□ -0.75
APTX-228ENST00000486724 RARSP54136 660 aaKnown RBP10.34□□□□□ -0.75
APTX-228ENST00000486724 RHBDL3P58872 404 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 KCNA10Q16322 511 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 BEND3Q5T5X7 828 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 CATSPERGQ6ZRH7 1159 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 RPUSD2Q8IZ73 545 aaKnown RBP10.34□□□□□ -0.75
APTX-228ENST00000486724 ABRAQ8N0Z2 381 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 SHCBP1Q8NEM2 672 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 LPIN2Q92539 896 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 LENG1Q96BZ8 264 aaPredicted RBP10.34□□□□□ -0.75
APTX-228ENST00000486724 MOV10L1Q9BXT6 1211 aaKnown RBP10.34□□□□□ -0.75
APTX-228ENST00000486724 UPF3BQ9BZI7 483 aaKnown RBP10.34□□□□□ -0.75
APTX-228ENST00000486724 HIPK3Q9H422 1215 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 C9orf78Q9NZ63 289 aaPredicted RBP10.34□□□□□ -0.75
APTX-228ENST00000486724 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 DENND2AQ9ULE3 1009 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 ZBTB21Q9ULJ3 1066 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 CFAP47Q6ZTR5 3102 aa10.34□□□□□ -0.75
APTX-228ENST00000486724 DMXL1Q9Y485 3027 aa10.33□□□□□ -0.75
APTX-228ENST00000486724 PKD1L2Q7Z442 2459 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 DNAH14Q0VDD8 3507 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 SIPA1L1O43166 1804 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 PTPRZ1P23471 2315 aaPredicted RBP10.33□□□□□ -0.76
APTX-228ENST00000486724 SPDYE16A6NNV3 312 aaPredicted RBP10.33□□□□□ -0.76
APTX-228ENST00000486724 ARVCFO00192 962 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 SEMA3EO15041 775 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 LPXNO60711 386 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 MAP4K4O95819 1239 aaPredicted RBP10.33□□□□□ -0.76
APTX-228ENST00000486724 JAG1P78504 1218 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 ZP2Q05996 745 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 TWISTNBQ3B726 338 aaPredicted RBP10.33□□□□□ -0.76
APTX-228ENST00000486724 BMP8AQ7Z5Y6 402 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 SUGP1Q8IWZ8 645 aaKnown RBP10.33□□□□□ -0.76
APTX-228ENST00000486724 KLHDC9Q8NEP7 349 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 FEZ1Q99689 392 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 PI4KBQ9UBF8 816 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 FAM50BQ9Y247 325 aa10.33□□□□□ -0.76
APTX-228ENST00000486724 KMT2EQ8IZD2 1858 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 GPR75-ASB3A0A0A6YYF3 556 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 VAMP4O75379 141 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 GDF11O95390 407 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 CD4P01730 458 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 VCAM1P19320 739 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 ERCC3P19447 782 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 ZYXQ15942 572 aaKnown RBP10.32□□□□□ -0.76
APTX-228ENST00000486724 ALDH1L2Q3SY69 923 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 CCSAPQ6IQ19 270 aaPredicted RBP10.32□□□□□ -0.76
APTX-228ENST00000486724 PCSK9Q8NBP7 692 aaKnown RBP10.32□□□□□ -0.76
APTX-228ENST00000486724 ATOH1Q92858 354 aaPredicted RBP10.32□□□□□ -0.76
APTX-228ENST00000486724 VTI1AQ96AJ9 217 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 SLC9A7Q96T83 725 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 MROH8Q9H579 483 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 CACNA1HO95180 2353 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 PLXNA3P51805 1871 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 UMODL1Q5DID0 1318 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 WDR87Q6ZQQ6 2873 aa10.32□□□□□ -0.76
APTX-228ENST00000486724 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 PROB1E7EW31 1015 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 ARHGEF15O94989 841 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 ASGR1P07306 291 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 PFKMP08237 780 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 ZNF865P0CJ78 1059 aaPredicted RBP10.31□□□□□ -0.76
APTX-228ENST00000486724 TAL1P17542 331 aaPredicted RBP10.31□□□□□ -0.76
APTX-228ENST00000486724 CST5P28325 142 aaPredicted RBP10.31□□□□□ -0.76
APTX-228ENST00000486724 USP14P54578 494 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 CCL23P55773 120 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 SHROOM1Q2M3G4 852 aaPredicted RBP10.31□□□□□ -0.76
APTX-228ENST00000486724 HERC4Q5GLZ8 1057 aaPredicted RBP10.31□□□□□ -0.76
APTX-228ENST00000486724 GDPD5Q8WTR4 605 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 SUCLG2Q96I99 432 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 TINF2Q9BSI4 451 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms