RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 LY9Q9HBG7 655 aa17.17■□□□□ 0.34
APH1A-208ENST00000486720 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
APH1A-208ENST00000486720 CATIPQ7Z7H3 387 aa17.16■□□□□ 0.34
APH1A-208ENST00000486720 SGMS1Q86VZ5 419 aa17.16■□□□□ 0.34
APH1A-208ENST00000486720 FBXL16Q8N461 479 aa17.16■□□□□ 0.34
APH1A-208ENST00000486720 SMCR8Q8TEV9 937 aaPredicted RBP17.16■□□□□ 0.34
APH1A-208ENST00000486720 ASCC2Q9H1I8 757 aaPredicted RBP17.16■□□□□ 0.34
APH1A-208ENST00000486720 MYPNQ86TC9 1320 aa17.16■□□□□ 0.34
APH1A-208ENST00000486720 TRPA1O75762 1119 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 FLOT1O75955 427 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 SNHG28P0DPA3 235 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 PDHBP11177 359 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 COG2Q14746 738 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 CCDC96Q2M329 555 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
APH1A-208ENST00000486720 SYNE3Q6ZMZ3 975 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 LRRC2Q9BYS8 371 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 HOXC10Q9NYD6 342 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 FEM1BQ9UK73 627 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
APH1A-208ENST00000486720 MTMR7Q9Y216 660 aa17.15■□□□□ 0.34
APH1A-208ENST00000486720 PLA2G6O60733 806 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 DDAH1O94760 285 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 CALM1P0DP23 149 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 CALM2P0DP24 149 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 CALM3P0DP25 149 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 CYP2C8P10632 490 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 CPA1P15085 419 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 GCLCP48506 637 aaPredicted RBP17.14■□□□□ 0.33
APH1A-208ENST00000486720 CRHR2Q13324 411 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
APH1A-208ENST00000486720 ASPRV1Q53RT3 343 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 Q6ZUG5 572 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 FAM160B2Q86V87 743 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 CHURC1Q8WUH1 139 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
APH1A-208ENST00000486720 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
APH1A-208ENST00000486720 SLC12A7Q9Y666 1083 aa17.14■□□□□ 0.33
APH1A-208ENST00000486720 TLR2O60603 784 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 PARP1P09874 1014 aaKnown RBP17.13■□□□□ 0.33
APH1A-208ENST00000486720 DSG3P32926 999 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 STAT2P52630 851 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 HERVK_113P62684 666 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 IKQ13123 557 aaPredicted RBP17.13■□□□□ 0.33
APH1A-208ENST00000486720 LBX2Q6XYB7 198 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 ZNF654Q8IZM8 581 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 MAP3K14Q99558 947 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
APH1A-208ENST00000486720 SLF1Q9BQI6 1058 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
APH1A-208ENST00000486720 PDRG1Q9NUG6 133 aa17.13■□□□□ 0.33
APH1A-208ENST00000486720 TMEM232C9JQI7 657 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 FDX1P10109 184 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 TROAPQ12815 778 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 ANKRD1Q15327 319 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
APH1A-208ENST00000486720 KCTD1Q719H9 257 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 MB21D1Q8N884 522 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
APH1A-208ENST00000486720 ALDH8A1Q9H2A2 487 aaPredicted RBP17.12■□□□□ 0.33
APH1A-208ENST00000486720 SENP2Q9HC62 589 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 PPP1R9AQ9ULJ8 1098 aa17.12■□□□□ 0.33
APH1A-208ENST00000486720 SPDYE16A6NNV3 312 aaPredicted RBP17.11■□□□□ 0.33
APH1A-208ENST00000486720 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 KIF5BP33176 963 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 RCAN1P53805 252 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 GRM4Q14833 912 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
APH1A-208ENST00000486720 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 BRF1Q92994 677 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 FBXO28Q9NVF7 368 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
APH1A-208ENST00000486720 ADGRA2Q96PE1 1338 aa17.11■□□□□ 0.33
APH1A-208ENST00000486720 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
APH1A-208ENST00000486720 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
APH1A-208ENST00000486720 GNAQP50148 359 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 NEK4P51957 841 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 RABEP1Q15276 862 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 FAM110CQ1W6H9 321 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 APOA5Q6Q788 366 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 C17orf99Q6UX52 265 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 BTNL9Q6UXG8 535 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 CHMP4CQ96CF2 233 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 RABGAP1Q9Y3P9 1069 aa17.1■□□□□ 0.33
APH1A-208ENST00000486720 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
APH1A-208ENST00000486720 PALM3A6NDB9 673 aaPredicted RBP17.09■□□□□ 0.33
APH1A-208ENST00000486720 ZBTB43O43298 467 aa17.09■□□□□ 0.33
APH1A-208ENST00000486720 ZBED4O75132 1171 aa17.09■□□□□ 0.33
APH1A-208ENST00000486720 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
APH1A-208ENST00000486720 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
APH1A-208ENST00000486720 RASGRP2Q7LDG7 609 aa17.09■□□□□ 0.33
APH1A-208ENST00000486720 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms