RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
USP4-212ENST00000486549 CCAR1Q8IX12 1150 aaKnown RBP17.41■□□□□ 0.38
USP4-212ENST00000486549 ATG4CQ96DT6 458 aa17.41■□□□□ 0.38
USP4-212ENST00000486549 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
USP4-212ENST00000486549 HOXC10Q9NYD6 342 aa17.41■□□□□ 0.38
USP4-212ENST00000486549 SRRDQ9UH36 339 aa17.41■□□□□ 0.38
USP4-212ENST00000486549 RABGAP1Q9Y3P9 1069 aa17.41■□□□□ 0.38
USP4-212ENST00000486549 RBM8AQ9Y5S9 174 aaKnown RBP17.41■□□□□ 0.38
USP4-212ENST00000486549 DOCK3Q8IZD9 2030 aa17.41■□□□□ 0.38
USP4-212ENST00000486549 CYP21A2P08686 494 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 DSG3P32926 999 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 PRKCZQ05513 592 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 Q3C1V9 767 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 LBX2Q6XYB7 198 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 GMCL1P1Q8NEA9 526 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 MAP4K1Q92918 833 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 COA7Q96BR5 231 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 KRT23Q9C075 422 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 LSG1Q9H089 658 aaKnown RBP17.4■□□□□ 0.38
USP4-212ENST00000486549 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
USP4-212ENST00000486549 BTBD7Q9P203 1132 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 SYNPO2Q9UMS6 1093 aa17.4■□□□□ 0.38
USP4-212ENST00000486549 PLS1Q14651 629 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 WDR78Q5VTH9 848 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 RAET1EQ8TD07 263 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 ZNF333Q96JL9 665 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 PORCNQ9H237 461 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 CNNM2Q9H8M5 875 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 GABRQQ9UN88 632 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 TAF6LQ9Y6J9 622 aa17.39■□□□□ 0.37
USP4-212ENST00000486549 HTTP42858 3142 aa17.38■□□□□ 0.37
USP4-212ENST00000486549 TOP1P11387 765 aaKnown RBP17.38■□□□□ 0.37
USP4-212ENST00000486549 MCCP23508 829 aa17.38■□□□□ 0.37
USP4-212ENST00000486549 CCNA1P78396 465 aa17.38■□□□□ 0.37
USP4-212ENST00000486549 IQCA1Q86XH1 822 aa17.38■□□□□ 0.37
USP4-212ENST00000486549 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
USP4-212ENST00000486549 TMEM47Q9BQJ4 181 aa17.38■□□□□ 0.37
USP4-212ENST00000486549 PPP1R9AQ9ULJ8 1098 aa17.38■□□□□ 0.37
USP4-212ENST00000486549 BMP3P12645 472 aa17.37■□□□□ 0.37
USP4-212ENST00000486549 SLC1A4P43007 532 aa17.37■□□□□ 0.37
USP4-212ENST00000486549 FLT3LGP49771 235 aa17.37■□□□□ 0.37
USP4-212ENST00000486549 TRDNQ13061 729 aa17.37■□□□□ 0.37
USP4-212ENST00000486549 IKQ13123 557 aaPredicted RBP17.37■□□□□ 0.37
USP4-212ENST00000486549 CCDC96Q2M329 555 aa17.37■□□□□ 0.37
USP4-212ENST00000486549 PLXNB2O15031 1838 aa17.37■□□□□ 0.37
USP4-212ENST00000486549 TMEM232C9JQI7 657 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 E7EWF7 191 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 MAPK4P31152 587 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 NOVP48745 357 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 NT5C2P49902 561 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 RCSD1Q6JBY9 416 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 RALYLQ86SE5 291 aaKnown RBP17.36■□□□□ 0.37
USP4-212ENST00000486549 MB21D1Q8N884 522 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 KIFC2Q96AC6 838 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 GMCL1Q96IK5 515 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 ZSCAN10Q96SZ4 725 aaPredicted RBP17.36■□□□□ 0.37
USP4-212ENST00000486549 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 SPATC1LQ9H0A9 340 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 ZSWIM5Q9P217 1185 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 TNKSO95271 1327 aa17.36■□□□□ 0.37
USP4-212ENST00000486549 VWA5AO00534 786 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 MYCP01106 439 aaPredicted RBP17.35■□□□□ 0.37
USP4-212ENST00000486549 TMEM132BQ14DG7 1078 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 CCDC178Q5BJE1 867 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 STOX1Q6ZVD7 989 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 CYB5R4Q7L1T6 521 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 GPR142Q7Z601 462 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 PLEKHH3Q7Z736 793 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 SLAIN1Q8ND83 568 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 TTC14Q96N46 770 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 MOV10L1Q9BXT6 1211 aaKnown RBP17.35■□□□□ 0.37
USP4-212ENST00000486549 FEM1BQ9UK73 627 aa17.35■□□□□ 0.37
USP4-212ENST00000486549 CTDP1Q9Y5B0 961 aaPredicted RBP17.35■□□□□ 0.37
USP4-212ENST00000486549 SLC27A2O14975 620 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 CAPN2P17655 700 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 GRK4P32298 578 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 STAT2P52630 851 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 UBXN2AP68543 259 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 FRMPD2Q68DX3 1309 aaPredicted RBP17.34■□□□□ 0.37
USP4-212ENST00000486549 NCAPG2Q86XI2 1143 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 DGKHQ86XP1 1220 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 ENAHQ8N8S7 591 aaPredicted RBP17.34■□□□□ 0.37
USP4-212ENST00000486549 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
USP4-212ENST00000486549 NCOA7Q8NI08 942 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 ADAMTS5Q9UNA0 930 aa17.34■□□□□ 0.37
USP4-212ENST00000486549 ADCY3O60266 1144 aa17.33■□□□□ 0.36
USP4-212ENST00000486549 ELNP15502 786 aa17.33■□□□□ 0.36
USP4-212ENST00000486549 ERCC3P19447 782 aa17.33■□□□□ 0.36
USP4-212ENST00000486549 SLC4A3P48751 1232 aa17.33■□□□□ 0.36
USP4-212ENST00000486549 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
USP4-212ENST00000486549 NUDT12Q9BQG2 462 aa17.33■□□□□ 0.36
USP4-212ENST00000486549 KAT14Q9H8E8 782 aa17.33■□□□□ 0.36
USP4-212ENST00000486549 BIN2Q9UBW5 565 aaPredicted RBP17.33■□□□□ 0.36
USP4-212ENST00000486549 IVNS1ABPQ9Y6Y0 642 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms