RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 FAM169BQ8N8A8 192 aa8.68□□□□□ -1.02
LTN1-206ENST00000486427 SYTL5Q8TDW5 730 aaPredicted RBP8.68□□□□□ -1.02
LTN1-206ENST00000486427 CPLX3Q8WVH0 158 aa8.68□□□□□ -1.02
LTN1-206ENST00000486427 DHRS1Q96LJ7 313 aa8.68□□□□□ -1.02
LTN1-206ENST00000486427 ALPK1Q96QP1 1244 aa8.68□□□□□ -1.02
LTN1-206ENST00000486427 SHOXO15266 292 aa8.67□□□□□ -1.02
LTN1-206ENST00000486427 PRAMEF1O95521 474 aa8.67□□□□□ -1.02
LTN1-206ENST00000486427 LTKP29376 864 aa8.67□□□□□ -1.02
LTN1-206ENST00000486427 AUHQ13825 339 aaKnown RBP8.67□□□□□ -1.02
LTN1-206ENST00000486427 ATG4DQ86TL0 474 aaPredicted RBP8.67□□□□□ -1.02
LTN1-206ENST00000486427 FLAD1Q8NFF5 587 aa8.67□□□□□ -1.02
LTN1-206ENST00000486427 ENOX1Q8TC92 643 aaKnown RBP8.67□□□□□ -1.02
LTN1-206ENST00000486427 ASCC2Q9H1I8 757 aaPredicted RBP8.67□□□□□ -1.02
LTN1-206ENST00000486427 FAM86C1Q9NVL1 165 aa8.67□□□□□ -1.02
LTN1-206ENST00000486427 A0A1W2PQH9 124 aa8.66□□□□□ -1.02
LTN1-206ENST00000486427 BTBD11A6QL63 1104 aa8.66□□□□□ -1.02
LTN1-206ENST00000486427 AXDND1Q5T1B0 1012 aaPredicted RBP8.66□□□□□ -1.02
LTN1-206ENST00000486427 CCDC144CPQ8IYA2 1237 aa8.66□□□□□ -1.02
LTN1-206ENST00000486427 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
LTN1-206ENST00000486427 OR6P1Q8NGX9 317 aa8.66□□□□□ -1.02
LTN1-206ENST00000486427 ADAMTS10Q9H324 1103 aa8.66□□□□□ -1.02
LTN1-206ENST00000486427 GFOD1Q9NXC2 390 aa8.66□□□□□ -1.02
LTN1-206ENST00000486427 SIGLEC6O43699 453 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 TP53P04637 393 aaPredicted RBP8.65□□□□□ -1.02
LTN1-206ENST00000486427 TEKQ02763 1124 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 DCAF15Q66K64 600 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 C7orf61Q8IZ16 206 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 C19orf47Q8N9M1 422 aaKnown RBP8.65□□□□□ -1.02
LTN1-206ENST00000486427 ANAPC16Q96DE5 110 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 TCTN2Q96GX1 697 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 FBXL21Q9UKT6 434 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
LTN1-206ENST00000486427 STRIP2Q9ULQ0 834 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 PCDHB12Q9Y5F1 795 aa8.65□□□□□ -1.02
LTN1-206ENST00000486427 CARMIL2Q6F5E8 1435 aa8.64□□□□□ -1.03
LTN1-206ENST00000486427 KRTAP4-8A0A0G2JLE6 195 aa8.64□□□□□ -1.03
LTN1-206ENST00000486427 JUNBP17275 347 aaPredicted RBP8.64□□□□□ -1.03
LTN1-206ENST00000486427 GDNFP39905 211 aa8.64□□□□□ -1.03
LTN1-206ENST00000486427 FYB2Q5VWT5 728 aa8.64□□□□□ -1.03
LTN1-206ENST00000486427 ZNF655Q8N720 491 aaPredicted RBP8.64□□□□□ -1.03
LTN1-206ENST00000486427 CHST7Q9NS84 486 aa8.64□□□□□ -1.03
LTN1-206ENST00000486427 TMEM59LQ9UK28 342 aa8.64□□□□□ -1.03
LTN1-206ENST00000486427 PCDHB10Q9UN67 800 aa8.64□□□□□ -1.03
LTN1-206ENST00000486427 MEIS1O00470 390 aa8.63□□□□□ -1.03
LTN1-206ENST00000486427 VPS37DQ86XT2 251 aa8.63□□□□□ -1.03
LTN1-206ENST00000486427 FOXP3Q9BZS1 431 aa8.63□□□□□ -1.03
LTN1-206ENST00000486427 MRVI1Q9Y6F6 885 aa8.63□□□□□ -1.03
LTN1-206ENST00000486427 BIN1O00499 593 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 ZGLP1P0C6A0 271 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 CTSKP43235 329 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 HK2P52789 917 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 ERVFC1P60507 584 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 GNL2Q13823 731 aaKnown RBP8.62□□□□□ -1.03
LTN1-206ENST00000486427 PPP2R5EQ16537 467 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 SMARCC1Q92922 1105 aaPredicted RBP8.62□□□□□ -1.03
LTN1-206ENST00000486427 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 ZNF281Q9Y2X9 895 aa8.62□□□□□ -1.03
LTN1-206ENST00000486427 FGRP09769 529 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 CASP7P55210 303 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 RNF111Q6ZNA4 994 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 KLHL6Q8WZ60 621 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
LTN1-206ENST00000486427 TCFL5Q9UL49 500 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 ZNF451Q9Y4E5 1061 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 SLC12A7Q9Y666 1083 aa8.61□□□□□ -1.03
LTN1-206ENST00000486427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
LTN1-206ENST00000486427 CBFA2T2O43439 604 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 SYPP08247 313 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 GNPTABQ3T906 1256 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 FAM168AQ92567 244 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.6□□□□□ -1.03
LTN1-206ENST00000486427 SP110Q9HB58 689 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 GP6Q9HCN6 339 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 PRR13Q9NZ81 148 aa8.6□□□□□ -1.03
LTN1-206ENST00000486427 TMEM82A0PJX8 343 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 FKTNO75072 461 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 SSBP05455 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
LTN1-206ENST00000486427 DNAJA1P31689 397 aaKnown RBP8.59□□□□□ -1.03
LTN1-206ENST00000486427 AFMP43652 599 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 PCBP3P57721 371 aaKnown RBP8.59□□□□□ -1.03
LTN1-206ENST00000486427 ZNF445P59923 1031 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 ARID5AQ03989 594 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 CRTC3Q6UUV7 619 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 ZPBP2Q6X784 338 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 MCF2L2Q86YR7 1114 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 BRF1Q92994 677 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 ASIC4Q96FT7 647 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 CCDC120Q96HB5 630 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 G6PC3Q9BUM1 346 aa8.59□□□□□ -1.03
LTN1-206ENST00000486427 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
LTN1-206ENST00000486427 HPXP02790 462 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 CD247P20963 164 aa8.58□□□□□ -1.04
LTN1-206ENST00000486427 RPL10P27635 214 aaKnown RBP8.58□□□□□ -1.04
LTN1-206ENST00000486427 TRHRP34981 398 aaPredicted RBP8.58□□□□□ -1.04
LTN1-206ENST00000486427 ETFBP38117 255 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms