RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 CERS3Q8IU89 383 aa8.42□□□□□ -1.06
TMC1-204ENST00000486417 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
TMC1-204ENST00000486417 EYA3Q99504 573 aa8.42□□□□□ -1.06
TMC1-204ENST00000486417 MTRQ99707 1265 aa8.42□□□□□ -1.06
TMC1-204ENST00000486417 ZKSCAN3Q9BRR0 538 aa8.42□□□□□ -1.06
TMC1-204ENST00000486417 EVA1BQ9NVM1 165 aa8.42□□□□□ -1.06
TMC1-204ENST00000486417 MKRN1Q9UHC7 482 aaKnown RBP8.42□□□□□ -1.06
TMC1-204ENST00000486417 TNKSO95271 1327 aa8.42□□□□□ -1.06
TMC1-204ENST00000486417 ERICH2A1L162 156 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 GOLGA6L3A6NEY3 463 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 H0YIN7 160 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 ORC4O43929 436 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 CDKL5O76039 1030 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 CCNYL3P0C7X3 344 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 CDC27P30260 824 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 CHRNA5P30532 468 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 BTDP43251 543 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 USP5P45974 858 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 RCAN1P53805 252 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 SEC23AQ15436 765 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 L1TD1Q5T7N2 865 aaKnown RBP8.41□□□□□ -1.06
TMC1-204ENST00000486417 FAM173BQ6P4H8 233 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 DEFB132Q7Z7B7 95 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 UBAC1Q9BSL1 405 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 MYL10Q9BUA6 226 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 ZC3H12CQ9C0D7 883 aaKnown RBP8.41□□□□□ -1.06
TMC1-204ENST00000486417 TMX4Q9H1E5 349 aaPredicted RBP8.41□□□□□ -1.06
TMC1-204ENST00000486417 ZSCAN16Q9H4T2 348 aaPredicted RBP8.41□□□□□ -1.06
TMC1-204ENST00000486417 TMEM63CQ9P1W3 806 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 ORC3Q9UBD5 711 aaPredicted RBP8.41□□□□□ -1.06
TMC1-204ENST00000486417 ISY1Q9ULR0 285 aaKnown RBP8.41□□□□□ -1.06
TMC1-204ENST00000486417 SLC12A7Q9Y666 1083 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 ELP1O95163 1332 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 STK36Q9NRP7 1315 aa8.41□□□□□ -1.06
TMC1-204ENST00000486417 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.06
TMC1-204ENST00000486417 GPR75-ASB3A0A0A6YYF3 556 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 RANBP6O60518 1105 aaKnown RBP8.4□□□□□ -1.06
TMC1-204ENST00000486417 PRDM1O75626 825 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 SLC3A2P08195 630 aaKnown RBP8.4□□□□□ -1.06
TMC1-204ENST00000486417 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
TMC1-204ENST00000486417 PTPN5P54829 565 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 ZNF445P59923 1031 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 UBE2HP62256 183 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 GTF2IP78347 998 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 KCNH2Q12809 1159 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 NTRK3Q16288 839 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 CPLX2Q6PUV4 134 aaKnown RBP8.4□□□□□ -1.06
TMC1-204ENST00000486417 SYNE3Q6ZMZ3 975 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 TTC6Q86TZ1 520 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 ZNF654Q8IZM8 581 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 TMTC2Q8N394 836 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 FAM174AQ8TBP5 190 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 CNKSR1Q969H4 720 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 C8orf76Q96K31 380 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.06
TMC1-204ENST00000486417 MCM9Q9NXL9 1143 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 SUGT1Q9Y2Z0 365 aa8.4□□□□□ -1.06
TMC1-204ENST00000486417 SOX11P35716 441 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 NT5C2P49902 561 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 RHBDL3P58872 404 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 PDE4BQ07343 736 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 RTN1Q16799 776 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 ILDR2Q71H61 639 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 IQCA1Q86XH1 822 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 MAPKAPK5Q8IW41 473 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 AMOTL1Q8IY63 956 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 CERS5Q8N5B7 392 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 ENAHQ8N8S7 591 aaPredicted RBP8.39□□□□□ -1.07
TMC1-204ENST00000486417 TGFBRAP1Q8WUH2 860 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 SYAP1Q96A49 352 aaPredicted RBP8.39□□□□□ -1.07
TMC1-204ENST00000486417 PDGFDQ9GZP0 370 aaPredicted RBP8.39□□□□□ -1.07
TMC1-204ENST00000486417 DAGLAQ9Y4D2 1042 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 SIPA1L1O43166 1804 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 FLT1P17948 1338 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 IFNAR1P17181 557 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 IARSP41252 1262 aaKnown RBP8.39□□□□□ -1.07
TMC1-204ENST00000486417 SLC4A8Q2Y0W8 1093 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 TJAP1Q5JTD0 557 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 IFIT1BQ5T764 474 aaKnown RBP8.39□□□□□ -1.07
TMC1-204ENST00000486417 GAS2L3Q86XJ1 694 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 FBXO18Q8NFZ0 1043 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 LEO1Q8WVC0 666 aaPredicted RBP8.39□□□□□ -1.07
TMC1-204ENST00000486417 PHKBQ93100 1093 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 SPATA32Q96LK8 384 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 ALG1Q9BT22 464 aa8.39□□□□□ -1.07
TMC1-204ENST00000486417 SCAND2PQ9GZW5 306 aaPredicted RBP8.39□□□□□ -1.07
TMC1-204ENST00000486417 GREB1LQ9C091 1923 aaPredicted RBP8.38□□□□□ -1.07
TMC1-204ENST00000486417 ATP9BO43861 1147 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 ECE2O60344 883 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 DDAH1O94760 285 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 ADH1BP00325 375 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 SSRP1Q08945 709 aaKnown RBP8.38□□□□□ -1.07
TMC1-204ENST00000486417 FAM47AQ5JRC9 791 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 OTUD7BQ6GQQ9 843 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms