RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PLS1Q14651 629 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 ALX1Q15699 326 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 FAM83BQ5T0W9 1011 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 VPS53Q5VIR6 699 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 SAMD1Q6SPF0 538 aaPredicted RBP21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 RILPL2Q969X0 211 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 FAM227BQ96M60 508 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 MROH8Q9H579 483 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 FBXO28Q9NVF7 368 aa21.9■■□□□ 1.1
PRPF40A-209ENST00000486100 TSPY3P0CV98 308 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 TSPY8P0CW00 308 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 TFAP4Q01664 338 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 TMEM132BQ14DG7 1078 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 CEP95Q96GE4 821 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 PPP1R9AQ9ULJ8 1098 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 SYNPO2Q9UMS6 1093 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 PLXNB2O15031 1838 aa21.89■■□□□ 1.09
PRPF40A-209ENST00000486100 A0A0D9SFI3 127 aa21.88■■□□□ 1.09
PRPF40A-209ENST00000486100 TTLL1O95922 423 aa21.88■■□□□ 1.09
PRPF40A-209ENST00000486100 FAM47AQ5JRC9 791 aa21.88■■□□□ 1.09
PRPF40A-209ENST00000486100 DPF3Q92784 378 aa21.88■■□□□ 1.09
PRPF40A-209ENST00000486100 HTATIP2Q9BUP3 242 aa21.88■■□□□ 1.09
PRPF40A-209ENST00000486100 ANAPC4Q9UJX5 808 aa21.88■■□□□ 1.09
PRPF40A-209ENST00000486100 MYH8P13535 1937 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 VWA5AO00534 786 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 SLC25A27O95847 323 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 NDUFB10O96000 172 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 CTDSPL2Q05D32 466 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 NMIQ13287 307 aaPredicted RBP21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 MFSD14CQ5VZR4 134 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 DPP9Q86TI2 863 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 NCAPG2Q86XI2 1143 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 ANKLE1Q8NAG6 615 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 NPLOC4Q8TAT6 608 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 NUP88Q99567 741 aaPredicted RBP21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 FLRT1Q9NZU1 646 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 PLIN4Q96Q06 1357 aa21.87■■□□□ 1.09
PRPF40A-209ENST00000486100 FGAP02671 866 aa21.86■■□□□ 1.09
PRPF40A-209ENST00000486100 SDSP20132 328 aa21.86■■□□□ 1.09
PRPF40A-209ENST00000486100 ADORA2AP29274 412 aa21.86■■□□□ 1.09
PRPF40A-209ENST00000486100 ABRAQ8N0Z2 381 aa21.86■■□□□ 1.09
PRPF40A-209ENST00000486100 INCENPQ9NQS7 918 aa21.86■■□□□ 1.09
PRPF40A-209ENST00000486100 OGDHLQ9ULD0 1010 aa21.86■■□□□ 1.09
PRPF40A-209ENST00000486100 HSPD1P10809 573 aaKnown RBP21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 STAT3P40763 770 aa21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 PPP4R3BQ5MIZ7 849 aa21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 RIOX2Q8IUF8 465 aa21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 PRPF38AQ8NAV1 312 aaKnown RBP21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 GMCL1P1Q8NEA9 526 aa21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 REPS2Q8NFH8 660 aa21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 PAWRQ96IZ0 340 aaKnown RBP21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 SLF1Q9BQI6 1058 aa21.85■■□□□ 1.09
PRPF40A-209ENST00000486100 RLFQ13129 1914 aa21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 COBLO75128 1261 aa21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 IGHA2P01877 340 aa21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 FGRP09769 529 aa21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 CCND3P30281 292 aaPredicted RBP21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 NECAB2Q7Z6G3 386 aa21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 ZNF589Q86UQ0 364 aaPredicted RBP21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 SLC5A4Q9NY91 659 aa21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 ZNF214Q9UL59 606 aaPredicted RBP21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 TACC3Q9Y6A5 838 aa21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 GREB1LQ9C091 1923 aaPredicted RBP21.84■■□□□ 1.09
PRPF40A-209ENST00000486100 TSPY2A6NKD2 308 aa21.83■■□□□ 1.09
PRPF40A-209ENST00000486100 FCER1AP12319 257 aa21.83■■□□□ 1.09
PRPF40A-209ENST00000486100 OLFML2BQ68BL8 750 aa21.83■■□□□ 1.09
PRPF40A-209ENST00000486100 SLFN13Q68D06 897 aa21.83■■□□□ 1.09
PRPF40A-209ENST00000486100 LHX8Q68G74 356 aa21.83■■□□□ 1.09
PRPF40A-209ENST00000486100 LRRC47Q8N1G4 583 aaKnown RBP21.83■■□□□ 1.09
PRPF40A-209ENST00000486100 CCDC171Q6TFL3 1326 aa21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 H0YGN5 161 aa21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 ORC4O43929 436 aa21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 COPB2P35606 906 aa21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 MNX1P50219 401 aaPredicted RBP21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 MFAP1P55081 439 aaKnown RBP21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 DIS3LQ8TF46 1054 aaKnown RBP21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 IL17RBQ9NRM6 502 aa21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 FEM1BQ9UK73 627 aa21.82■■□□□ 1.08
PRPF40A-209ENST00000486100 ZMYM6O95789 1325 aa21.81■■□□□ 1.08
PRPF40A-209ENST00000486100 RANBP6O60518 1105 aaKnown RBP21.81■■□□□ 1.08
PRPF40A-209ENST00000486100 ZBED4O75132 1171 aa21.81■■□□□ 1.08
PRPF40A-209ENST00000486100 BMP3P12645 472 aa21.81■■□□□ 1.08
PRPF40A-209ENST00000486100 CYP2C19P33261 490 aa21.81■■□□□ 1.08
PRPF40A-209ENST00000486100 NBPF3Q9H094 633 aa21.81■■□□□ 1.08
PRPF40A-209ENST00000486100 A0A0G2JMZ2 1700 aa21.8■■□□□ 1.08
PRPF40A-209ENST00000486100 HIP1O00291 1037 aa21.8■■□□□ 1.08
PRPF40A-209ENST00000486100 MMP19Q99542 508 aa21.8■■□□□ 1.08
PRPF40A-209ENST00000486100 TEX13BQ9BXU2 312 aa21.8■■□□□ 1.08
PRPF40A-209ENST00000486100 STX8Q9UNK0 236 aa21.8■■□□□ 1.08
PRPF40A-209ENST00000486100 NR2E3Q9Y5X4 410 aa21.8■■□□□ 1.08
PRPF40A-209ENST00000486100 ATP2A1O14983 1001 aa21.79■■□□□ 1.08
PRPF40A-209ENST00000486100 NOVP48745 357 aa21.79■■□□□ 1.08
PRPF40A-209ENST00000486100 KCTD2Q14681 263 aa21.79■■□□□ 1.08
PRPF40A-209ENST00000486100 CWC27Q6UX04 472 aaKnown RBP21.79■■□□□ 1.08
PRPF40A-209ENST00000486100 KIFC2Q96AC6 838 aa21.79■■□□□ 1.08
PRPF40A-209ENST00000486100 GMCL1Q96IK5 515 aa21.79■■□□□ 1.08
PRPF40A-209ENST00000486100 DIAPH3Q9NSV4 1193 aa21.79■■□□□ 1.08
PRPF40A-209ENST00000486100 CTDP1Q9Y5B0 961 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms