RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 TRIM32Q13049 653 aa23.22■■□□□ 1.31
SNX5-213ENST00000486039 CWC27Q6UX04 472 aaKnown RBP23.22■■□□□ 1.31
SNX5-213ENST00000486039 MB21D1Q8N884 522 aa23.22■■□□□ 1.31
SNX5-213ENST00000486039 TRIB2Q92519 343 aa23.22■■□□□ 1.31
SNX5-213ENST00000486039 DEFB118Q96PH6 123 aa23.22■■□□□ 1.31
SNX5-213ENST00000486039 HTATIP2Q9BUP3 242 aa23.22■■□□□ 1.31
SNX5-213ENST00000486039 MOV10L1Q9BXT6 1211 aaKnown RBP23.22■■□□□ 1.31
SNX5-213ENST00000486039 SPATC1LQ9H0A9 340 aa23.22■■□□□ 1.31
SNX5-213ENST00000486039 ADAMTS5Q9UNA0 930 aa23.22■■□□□ 1.31
SNX5-213ENST00000486039 FARP2O94887 1054 aaPredicted RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 TTLL1O95922 423 aa23.21■■□□□ 1.31
SNX5-213ENST00000486039 NDUFB10O96000 172 aa23.21■■□□□ 1.31
SNX5-213ENST00000486039 HMGCRP04035 888 aa23.21■■□□□ 1.31
SNX5-213ENST00000486039 FGRP09769 529 aa23.21■■□□□ 1.31
SNX5-213ENST00000486039 XRCC5P13010 732 aaKnown RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 GSPT1P15170 499 aaKnown RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 WDR78Q5VTH9 848 aa23.21■■□□□ 1.31
SNX5-213ENST00000486039 SAMD1Q6SPF0 538 aaPredicted RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 NUP88Q99567 741 aaPredicted RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 CWC22Q9HCG8 908 aaKnown RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 PAK6Q9NQU5 681 aaPredicted RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 COLQQ9Y215 455 aaPredicted RBP23.21■■□□□ 1.31
SNX5-213ENST00000486039 ZMYM6O95789 1325 aa23.21■■□□□ 1.31
SNX5-213ENST00000486039 A0A0G2JMZ2 1700 aa23.21■■□□□ 1.31
SNX5-213ENST00000486039 TFRCP02786 760 aaKnown RBP23.2■■□□□ 1.3
SNX5-213ENST00000486039 PTPREP23469 700 aa23.2■■□□□ 1.3
SNX5-213ENST00000486039 TTC22Q5TAA0 569 aa23.2■■□□□ 1.3
SNX5-213ENST00000486039 DIAPH3Q9NSV4 1193 aa23.2■■□□□ 1.3
SNX5-213ENST00000486039 PPP1R9AQ9ULJ8 1098 aa23.2■■□□□ 1.3
SNX5-213ENST00000486039 SLC15A5A6NIM6 579 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 HIP1O00291 1037 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 RGS2P41220 211 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 MAP2K5Q13163 448 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 TMEM132BQ14DG7 1078 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 LRRC47Q8N1G4 583 aaKnown RBP23.19■■□□□ 1.3
SNX5-213ENST00000486039 CRISPLD2Q9H0B8 497 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.19■■□□□ 1.32e-6■□□□□ 9.9
SNX5-213ENST00000486039 IL17RBQ9NRM6 502 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 SYNPO2Q9UMS6 1093 aa23.19■■□□□ 1.3
SNX5-213ENST00000486039 PARP14Q460N5 1801 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 TSPY2A6NKD2 308 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 ORC4O43929 436 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 ERCC3P19447 782 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 MFAP1P55081 439 aaKnown RBP23.18■■□□□ 1.3
SNX5-213ENST00000486039 GRB14Q14449 540 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 CCL14Q16627 93 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 SHCBP1Q8NEM2 672 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 APBA2Q99767 749 aa23.18■■□□□ 1.3
SNX5-213ENST00000486039 VWA5AO00534 786 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 RANBP6O60518 1105 aaKnown RBP23.17■■□□□ 1.3
SNX5-213ENST00000486039 NMT2O60551 498 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 HAND2P61296 217 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 PLS1Q14651 629 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 GMCL1P1Q8NEA9 526 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 REPS2Q8NFH8 660 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 NBPF3Q9H094 633 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 IVNS1ABPQ9Y6Y0 642 aa23.17■■□□□ 1.3
SNX5-213ENST00000486039 RPTORQ8N122 1335 aa23.16■■□□□ 1.3
SNX5-213ENST00000486039 ZKSCAN1P17029 563 aaPredicted RBP23.16■■□□□ 1.3
SNX5-213ENST00000486039 MAP3K21Q5TCX8 1036 aa23.16■■□□□ 1.3
SNX5-213ENST00000486039 TRMT44Q8IYL2 757 aaKnown RBP23.16■■□□□ 1.3
SNX5-213ENST00000486039 SLF1Q9BQI6 1058 aa23.16■■□□□ 1.3
SNX5-213ENST00000486039 IL25Q9H293 177 aa23.16■■□□□ 1.3
SNX5-213ENST00000486039 SLFN13Q68D06 897 aa23.15■■□□□ 1.3
SNX5-213ENST00000486039 NPLOC4Q8TAT6 608 aa23.15■■□□□ 1.3
SNX5-213ENST00000486039 TOMM22Q9NS69 142 aa23.15■■□□□ 1.3
SNX5-213ENST00000486039 FLRT1Q9NZU1 646 aa23.15■■□□□ 1.3
SNX5-213ENST00000486039 MYH4Q9Y623 1939 aa23.15■■□□□ 1.3
SNX5-213ENST00000486039 HOXC6P09630 235 aa23.14■■□□□ 1.29
SNX5-213ENST00000486039 PRKAR2AP13861 404 aaKnown RBP23.14■■□□□ 1.29
SNX5-213ENST00000486039 NOVP48745 357 aa23.14■■□□□ 1.29
SNX5-213ENST00000486039 FXR1P51114 621 aaKnown RBP eCLIP23.14■■□□□ 1.29
SNX5-213ENST00000486039 RRP12Q5JTH9 1297 aaKnown RBP23.14■■□□□ 1.29
SNX5-213ENST00000486039 NCAPG2Q86XI2 1143 aa23.14■■□□□ 1.29
SNX5-213ENST00000486039 TBC1D10CQ8IV04 446 aa23.14■■□□□ 1.29
SNX5-213ENST00000486039 MROH8Q9H579 483 aa23.14■■□□□ 1.29
SNX5-213ENST00000486039 HMX1Q9NP08 348 aaPredicted RBP23.14■■□□□ 1.29
SNX5-213ENST00000486039 ZNF214Q9UL59 606 aaPredicted RBP23.14■■□□□ 1.29
SNX5-213ENST00000486039 STX8Q9UNK0 236 aa23.14■■□□□ 1.29
SNX5-213ENST00000486039 NR2E3Q9Y5X4 410 aa23.14■■□□□ 1.29
SNX5-213ENST00000486039 CEP290O15078 2479 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 STRNO43815 780 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 ADORA2AP29274 412 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 STAT3P40763 770 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 CACNB2Q08289 660 aaPredicted RBP23.13■■□□□ 1.29
SNX5-213ENST00000486039 PPP4R3BQ5MIZ7 849 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 AKNAD1Q5T1N1 836 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 CHRDL2Q6WN34 429 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 RIOX2Q8IUF8 465 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 PRPF38AQ8NAV1 312 aaKnown RBP23.13■■□□□ 1.29
SNX5-213ENST00000486039 STAG1Q8WVM7 1258 aa23.13■■□□□ 1.29
SNX5-213ENST00000486039 SLC25A27O95847 323 aa23.12■■□□□ 1.29
SNX5-213ENST00000486039 BMP3P12645 472 aa23.12■■□□□ 1.29
SNX5-213ENST00000486039 MFSD6Q6ZSS7 791 aa23.12■■□□□ 1.29
SNX5-213ENST00000486039 ANKLE1Q8NAG6 615 aa23.12■■□□□ 1.29
SNX5-213ENST00000486039 PAWRQ96IZ0 340 aaKnown RBP23.12■■□□□ 1.29
SNX5-213ENST00000486039 DSCC1Q9BVC3 393 aa23.12■■□□□ 1.29
SNX5-213ENST00000486039 FEM1BQ9UK73 627 aa23.12■■□□□ 1.29
SNX5-213ENST00000486039 COL11A1P12107 1806 aaPredicted RBP23.11■■□□□ 1.29
SNX5-213ENST00000486039 COBLO75128 1261 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms