RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 HMGCS2P54868 508 aa18.48■□□□□ 0.55
APOE-205ENST00000485628 ASPRV1Q53RT3 343 aa18.48■□□□□ 0.55
APOE-205ENST00000485628 GPAT2Q6NUI2 795 aa18.48■□□□□ 0.55
APOE-205ENST00000485628 CCDC102AQ96A19 550 aa18.48■□□□□ 0.55
APOE-205ENST00000485628 GOLGA8BA8MQT2 603 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 K7ELQ4 463 aaPredicted RBP18.47■□□□□ 0.55
APOE-205ENST00000485628 RXRAP19793 462 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 ADD1P35611 737 aaKnown RBP18.47■□□□□ 0.55
APOE-205ENST00000485628 GTF2A2P52657 109 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 SNAPC2Q13487 334 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 GPATCH4Q5T3I0 446 aaKnown RBP18.47■□□□□ 0.55
APOE-205ENST00000485628 SYNE3Q6ZMZ3 975 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 NBPF11Q86T75 865 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 MICU3Q86XE3 530 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 SLKQ9H2G2 1235 aaPredicted RBP18.47■□□□□ 0.55
APOE-205ENST00000485628 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
APOE-205ENST00000485628 CYTH3O43739 400 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 PARP1P09874 1014 aaKnown RBP18.46■□□□□ 0.55
APOE-205ENST00000485628 BMP3P12645 472 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 SLC1A4P43007 532 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 METAP2P50579 478 aaKnown RBP eCLIP18.46■□□□□ 0.55
APOE-205ENST00000485628 TMTC3Q6ZXV5 915 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 RAB11FIP4Q86YS3 637 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 SPICE1Q8N0Z3 855 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 SRBD1Q8N5C6 995 aaKnown RBP18.46■□□□□ 0.55
APOE-205ENST00000485628 MTMR8Q96EF0 704 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 NUP88Q99567 741 aaPredicted RBP18.46■□□□□ 0.55
APOE-205ENST00000485628 FEZ1Q99689 392 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 NCOA5Q9HCD5 579 aaKnown RBP18.46■□□□□ 0.55
APOE-205ENST00000485628 RBM28Q9NW13 759 aaKnown RBP18.46■□□□□ 0.55
APOE-205ENST00000485628 ADAMTS5Q9UNA0 930 aa18.46■□□□□ 0.55
APOE-205ENST00000485628 BAZ2BQ9UIF8 2168 aaKnown RBP18.45■□□□□ 0.54
APOE-205ENST00000485628 GOLGA8AA7E2F4 631 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 CETPP11597 493 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 IFNAR1P17181 557 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 GNAQP50148 359 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 ZYXQ15942 572 aaKnown RBP18.45■□□□□ 0.54
APOE-205ENST00000485628 RTN1Q16799 776 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 FAM83BQ5T0W9 1011 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 TTBK2Q6IQ55 1244 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 CATSPERGQ6ZRH7 1159 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 NOL8Q76FK4 1167 aaKnown RBP18.45■□□□□ 0.54
APOE-205ENST00000485628 FASTKD5Q7L8L6 764 aaKnown RBP18.45■□□□□ 0.54
APOE-205ENST00000485628 NECAB1Q8N987 351 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 NUP133Q8WUM0 1156 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 BRI3BPQ8WY22 251 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 PTPN18Q99952 460 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 SPZ1Q9BXG8 430 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 ABT1Q9ULW3 272 aaKnown RBP18.45■□□□□ 0.54
APOE-205ENST00000485628 AGTPBP1Q9UPW5 1226 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 SLC45A1Q9Y2W3 748 aa18.45■□□□□ 0.54
APOE-205ENST00000485628 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 PLEKHA8P1O95397 391 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 GOLGA8HP0CJ92 632 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 KIF5BP33176 963 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 CCT2P78371 535 aaKnown RBP18.44■□□□□ 0.54
APOE-205ENST00000485628 STK3Q13188 491 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 DEFB115Q30KQ5 88 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 TREML2Q5T2D2 321 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 POTEEQ6S8J3 1075 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 CTCFLQ8NI51 663 aaPredicted RBP18.44■□□□□ 0.54
APOE-205ENST00000485628 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 LZTS2Q9BRK4 669 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 TMOD4Q9NZQ9 345 aa18.44■□□□□ 0.54
APOE-205ENST00000485628 TM4SF4P48230 202 aa18.43■□□□□ 0.54
APOE-205ENST00000485628 CCDC144CPQ8IYA2 1237 aa18.43■□□□□ 0.54
APOE-205ENST00000485628 NSUN7Q8NE18 718 aaKnown RBP18.43■□□□□ 0.54
APOE-205ENST00000485628 INTS4Q96HW7 963 aaKnown RBP18.43■□□□□ 0.54
APOE-205ENST00000485628 LLPHQ9BRT6 129 aaKnown RBP18.43■□□□□ 0.54
APOE-205ENST00000485628 RPAP3Q9H6T3 665 aaPredicted RBP18.43■□□□□ 0.54
APOE-205ENST00000485628 FEM1BQ9UK73 627 aa18.43■□□□□ 0.54
APOE-205ENST00000485628 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
APOE-205ENST00000485628 MYPNQ86TC9 1320 aa18.43■□□□□ 0.54
APOE-205ENST00000485628 CNTNAP5Q8WYK1 1306 aa18.43■□□□□ 0.54
APOE-205ENST00000485628 MANSC4A6NHS7 340 aaPredicted RBP18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L15C9J2P7 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 BTBD19C9JJ37 291 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L13C9JLJ4 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 TMEM232C9JQI7 657 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L11C9JVI0 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L18D6R9N7 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L22D6RA61 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L17D6RBQ6 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L19D6RCP7 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L20D6RJB6 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 INHBEP58166 350 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 USP17L24Q0WX57 530 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 ANKRD23Q86SG2 305 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 FAM160B2Q86V87 743 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 CCDC83Q8IWF9 413 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 HSCBQ8IWL3 235 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 ZIC5Q96T25 663 aa18.42■□□□□ 0.54
APOE-205ENST00000485628 THSD7BQ9C0I4 1608 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 A0A0G2JMZ2 1700 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
APOE-205ENST00000485628 FDPSP14324 419 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms