RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 LPAR1Q92633 364 aa20.63■□□□□ 0.89
SMARCD3-212ENST00000485610 OTUD5Q96G74 571 aa20.63■□□□□ 0.89
SMARCD3-212ENST00000485610 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.63■□□□□ 0.89
SMARCD3-212ENST00000485610 TRIM75PA6NK02 468 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 C19orf81C9J6K1 198 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 ZNF543Q08ER8 600 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 USP17L2Q6R6M4 530 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 NSUN7Q8NE18 718 aaKnown RBP20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 LZTS2Q9BRK4 669 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 FRMPD2Q68DX3 1309 aaPredicted RBP20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 IFNAR1P17181 557 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 SPICE1Q8N0Z3 855 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 STAG2Q8N3U4 1231 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 OPTNQ96CV9 577 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 SLC10A4Q96EP9 437 aa20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
SMARCD3-212ENST00000485610 PTPDC1A2A3K4 754 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 PLEKHA8P1O95397 391 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 CTDNEP1O95476 244 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 GOLGA8HP0CJ92 632 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 BMP3P12645 472 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 HUNKP57058 714 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 NTRK3Q16288 839 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 KIAA1755Q5JYT7 1200 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 C12orf42Q96LP6 360 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 FOXD4L1Q9NU39 408 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 SMC3Q9UQE7 1217 aa20.61■□□□□ 0.89
SMARCD3-212ENST00000485610 RLFQ13129 1914 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 KLRF2D3W0D1 207 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 CXCL11O14625 94 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 WDR46O15213 610 aaKnown RBP20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 HMGCS2P54868 508 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 HMGN5P82970 282 aaKnown RBP20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 SMARCC2Q8TAQ2 1214 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 GPCPD1Q9NPB8 672 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 TMOD4Q9NZQ9 345 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 KCNH4Q9UQ05 1017 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 CNTNAP5Q8WYK1 1306 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 STK36Q9NRP7 1315 aa20.6■□□□□ 0.89
SMARCD3-212ENST00000485610 IRF6O14896 467 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 JAK2O60674 1132 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 SH3D19Q5HYK7 790 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 FAM83BQ5T0W9 1011 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 KCTD1Q719H9 257 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 TRIM22Q8IYM9 498 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 WNK4Q96J92 1243 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 NUP88Q99567 741 aaPredicted RBP20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 SPZ1Q9BXG8 430 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 EMILIN3Q9NT22 766 aa20.59■□□□□ 0.89
SMARCD3-212ENST00000485610 VCAM1P19320 739 aa20.58■□□□□ 0.89
SMARCD3-212ENST00000485610 SMARCA1P28370 1054 aa20.58■□□□□ 0.89
SMARCD3-212ENST00000485610 FUT2Q10981 343 aa20.58■□□□□ 0.89
SMARCD3-212ENST00000485610 SRBD1Q8N5C6 995 aaKnown RBP20.58■□□□□ 0.89
SMARCD3-212ENST00000485610 A0A0G2JLL6 359 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 TMEM88BA6NKF7 163 aa20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 FMNL1O95466 1100 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 GJA5P36382 358 aa20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 SSRP1Q08945 709 aaKnown RBP20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 PRRT2Q7Z6L0 340 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 NBPF11Q86T75 865 aa20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 SAPCD2Q86UD0 394 aa20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 CMTR1Q8N1G2 835 aaKnown RBP20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 PHKBQ93100 1093 aa20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 SLC26A6Q9BXS9 759 aa20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 RNF26Q9BY78 433 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 TLL2Q9Y6L7 1015 aa20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 COL11A1P12107 1806 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-212ENST00000485610 TMEM232C9JQI7 657 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 GJB2P29033 226 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 STAT2P52630 851 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 DGKZQ13574 1117 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 TTBK2Q6IQ55 1244 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 CCDC82Q8N4S0 544 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 DDX11Q96FC9 970 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 CWC22Q9HCG8 908 aaKnown RBP20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 RBM27Q9P2N5 1060 aaKnown RBP20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 ORC3Q9UBD5 711 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 KIF3AQ9Y496 699 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 PLA2G6O60733 806 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 ZBTB48P10074 688 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 AKAP17AQ02040 695 aaKnown RBP20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 IKQ13123 557 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 SNAPC2Q13487 334 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 SLC35G1Q2M3R5 365 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 BTNL9Q6UXG8 535 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 FAM160B2Q86V87 743 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 PROCA1Q8NCQ7 364 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 CPVLQ9H3G5 476 aa20.56■□□□□ 0.88
SMARCD3-212ENST00000485610 PRPF3O43395 683 aaKnown RBP20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 CYTH3O43739 400 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 DTNBO60941 627 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 PPFIA3O75145 1194 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 SPRYD7Q5W111 196 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 CHURC1Q8WUH1 139 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 UBA5Q9GZZ9 404 aa20.55■□□□□ 0.88
SMARCD3-212ENST00000485610 RPAP3Q9H6T3 665 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms