RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 NUP88Q99567 741 aaPredicted RBP23.34■■□□□ 1.33
COL6A2-208ENST00000485591 LRRC2Q9BYS8 371 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 TANGO6Q9C0B7 1094 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 SENP2Q9HC62 589 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 GPHNQ9NQX3 736 aaPredicted RBP23.34■■□□□ 1.33
COL6A2-208ENST00000485591 CYP46A1Q9Y6A2 500 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 CEP350Q5VT06 3117 aa23.33■■□□□ 1.33
COL6A2-208ENST00000485591 TRPA1O75762 1119 aa23.33■■□□□ 1.33
COL6A2-208ENST00000485591 SNHG28P0DPA3 235 aa23.33■■□□□ 1.33
COL6A2-208ENST00000485591 PDHBP11177 359 aa23.33■■□□□ 1.33
COL6A2-208ENST00000485591 SLC1A4P43007 532 aa23.33■■□□□ 1.33
COL6A2-208ENST00000485591 CRHR2Q13324 411 aa23.33■■□□□ 1.33
COL6A2-208ENST00000485591 ZFYVE28Q9HCC9 887 aa23.33■■□□□ 1.33
COL6A2-208ENST00000485591 ADGRA2Q96PE1 1338 aa23.33■■□□□ 1.32
COL6A2-208ENST00000485591 COL11A1P12107 1806 aaPredicted RBP23.32■■□□□ 1.32
COL6A2-208ENST00000485591 CYP2C8P10632 490 aa23.32■■□□□ 1.32
COL6A2-208ENST00000485591 BMP3P12645 472 aa23.32■■□□□ 1.32
COL6A2-208ENST00000485591 RASGRP2Q7LDG7 609 aa23.32■■□□□ 1.32
COL6A2-208ENST00000485591 SGMS1Q86VZ5 419 aa23.32■■□□□ 1.32
COL6A2-208ENST00000485591 FBXL16Q8N461 479 aa23.32■■□□□ 1.32
COL6A2-208ENST00000485591 UPF3BQ9BZI7 483 aaKnown RBP23.32■■□□□ 1.32
COL6A2-208ENST00000485591 MTMR7Q9Y216 660 aa23.32■■□□□ 1.32
COL6A2-208ENST00000485591 MYPNQ86TC9 1320 aa23.32■■□□□ 1.32
COL6A2-208ENST00000485591 AGXT2Q9BYV1 514 aa23.31■■□□□ 1.32
COL6A2-208ENST00000485591 CCDC69A6NI79 296 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 TLR2O60603 784 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 FLOT1O75955 427 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 COG2Q14746 738 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 CCDC96Q2M329 555 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 Q6ZUG5 572 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 ZNF654Q8IZM8 581 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 SMCR8Q8TEV9 937 aaPredicted RBP23.3■■□□□ 1.32
COL6A2-208ENST00000485591 P2RX7Q99572 595 aaKnown RBP23.3■■□□□ 1.32
COL6A2-208ENST00000485591 FEM1BQ9UK73 627 aa23.3■■□□□ 1.32
COL6A2-208ENST00000485591 DDAH1O94760 285 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 TBC1D8O95759 1140 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 HERVK_113P62684 666 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 FGD1P98174 961 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 ZNF543Q08ER8 600 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 TROAPQ12815 778 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 LBX2Q6XYB7 198 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 KCTD1Q719H9 257 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 CATIPQ7Z7H3 387 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 GTF3C2Q8WUA4 911 aaPredicted RBP23.29■■□□□ 1.32
COL6A2-208ENST00000485591 TBC1D32Q96NH3 1257 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 FBXO28Q9NVF7 368 aa23.29■■□□□ 1.32
COL6A2-208ENST00000485591 SPDYE16A6NNV3 312 aaPredicted RBP23.28■■□□□ 1.32
COL6A2-208ENST00000485591 PLA2G6O60733 806 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 DSG3P32926 999 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 GCLCP48506 637 aaPredicted RBP23.28■■□□□ 1.32
COL6A2-208ENST00000485591 STAT2P52630 851 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 ASPRV1Q53RT3 343 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 GPATCH4Q5T3I0 446 aaKnown RBP23.28■■□□□ 1.32
COL6A2-208ENST00000485591 FAM160B2Q86V87 743 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 CHMP4CQ96CF2 233 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 KIF2CQ99661 725 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 R3HDMLQ9H3Y0 253 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 HOXC10Q9NYD6 342 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 PPP1R9AQ9ULJ8 1098 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 ISY1Q9ULR0 285 aaKnown RBP23.28■■□□□ 1.32
COL6A2-208ENST00000485591 SLC12A7Q9Y666 1083 aa23.28■■□□□ 1.32
COL6A2-208ENST00000485591 FRMPD2Q68DX3 1309 aaPredicted RBP23.28■■□□□ 1.32
COL6A2-208ENST00000485591 TMEM232C9JQI7 657 aa23.27■■□□□ 1.32
COL6A2-208ENST00000485591 PARP1P09874 1014 aaKnown RBP23.27■■□□□ 1.32
COL6A2-208ENST00000485591 HSPA1AP0DMV8 641 aaKnown RBP23.27■■□□□ 1.32
COL6A2-208ENST00000485591 HSPA1BP0DMV9 641 aaKnown RBP23.27■■□□□ 1.32
COL6A2-208ENST00000485591 GRM4Q14833 912 aa23.27■■□□□ 1.32
COL6A2-208ENST00000485591 NOM1Q5C9Z4 860 aaKnown RBP23.27■■□□□ 1.32
COL6A2-208ENST00000485591 BRF1Q92994 677 aa23.27■■□□□ 1.32
COL6A2-208ENST00000485591 MAP3K14Q99558 947 aa23.27■■□□□ 1.32
COL6A2-208ENST00000485591 PDRG1Q9NUG6 133 aa23.27■■□□□ 1.32
COL6A2-208ENST00000485591 CALM1P0DP23 149 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 CALM2P0DP24 149 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 CALM3P0DP25 149 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 APOA5Q6Q788 366 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 C17orf99Q6UX52 265 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 BTNL9Q6UXG8 535 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 PRPF38AQ8NAV1 312 aaKnown RBP23.26■■□□□ 1.31
COL6A2-208ENST00000485591 CHURC1Q8WUH1 139 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 ALDH8A1Q9H2A2 487 aaPredicted RBP23.26■■□□□ 1.31
COL6A2-208ENST00000485591 ADAMTS5Q9UNA0 930 aa23.26■■□□□ 1.31
COL6A2-208ENST00000485591 BCRP11274 1271 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 TOB2Q14106 344 aaPredicted RBP23.25■■□□□ 1.31
COL6A2-208ENST00000485591 POTEEQ6S8J3 1075 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 MYL10Q9BUA6 226 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 GPCPD1Q9NPB8 672 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 CPA4Q9UI42 421 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 BRPF3Q9ULD4 1205 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 MGAMO43451 1857 aa23.25■■□□□ 1.31
COL6A2-208ENST00000485591 KLF18A0A0U1RQI7 1052 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 PALM3A6NDB9 673 aaPredicted RBP23.24■■□□□ 1.31
COL6A2-208ENST00000485591 GOLGA8HP0CJ92 632 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 RCAN1P53805 252 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 IKQ13123 557 aaPredicted RBP23.24■■□□□ 1.31
COL6A2-208ENST00000485591 TTBK2Q6IQ55 1244 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 SYNE3Q6ZMZ3 975 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 MB21D1Q8N884 522 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms