RNA–Protein interactions for RNA: ENST00000485087.5

TAF1-218, Transcript of TATA-box binding protein associated factor 1, human

TSL 5

Gene TAF1, Length 1,738 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1-218	ENST00000485087	CCT2	P78371	535 aa	Known RBP	13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	CCL15	Q16663	113 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	ME3	Q16798	604 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	TTBK2	Q6IQ55	1244 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	SYNE3	Q6ZMZ3	975 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	STAG2	Q8N3U4	1231 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	GMCL1	Q96IK5	515 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	C12orf42	Q96LP6	360 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	CPVL	Q9H3G5	476 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	NCOA5	Q9HCD5	579 aa	Known RBP	13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	GPCPD1	Q9NPB8	672 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	LIMCH1	Q9UPQ0	1083 aa		13.46	□□□□□ -0.25
TAF1-218	ENST00000485087	DTNB	O60941	627 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	DDAH1	O94760	285 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	CETP	P11597	493 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	BMP3	P12645	472 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	VEGFB	P49765	207 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	GRM4	Q14833	912 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	CCDC96	Q2M329	555 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	GPAT2	Q6NUI2	795 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	NECAB1	Q8N987	351 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	FANCB	Q8NB91	859 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	DCAF4	Q8WV16	495 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	LPAR1	Q92633	364 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	ZNF274	Q96GC6	653 aa	Predicted RBP	13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	PTPN18	Q99952	460 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	FBXO28	Q9NVF7	368 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	MAD2L2	Q9UI95	211 aa		13.45	□□□□□ -0.26
TAF1-218	ENST00000485087	GOLGA8A	A7E2F4	631 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	PARP1	P09874	1014 aa	Known RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	CDC27	P30260	824 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	METAP2	P50579	478 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	KIF23	Q02241	960 aa	Predicted RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	ZNF543	Q08ER8	600 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	CMTR1	Q8N1G2	835 aa	Known RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	RLF	Q13129	1914 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	PALM3	A6NDB9	673 aa	Predicted RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	BTBD19	C9JJ37	291 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	TMEM232	C9JQI7	657 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	WDR46	O15213	610 aa	Known RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	PLEKHA8P1	O95397	391 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	ADD1	P35611	737 aa	Known RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	SLC16A2	P36021	539 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	FASTKD5	Q7L8L6	764 aa	Known RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	NBPF11	Q86T75	865 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	FAM43A	Q8N2R8	423 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	TANGO6	Q9C0B7	1094 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	UBA5	Q9GZZ9	404 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	AGTPBP1	Q9UPW5	1226 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	PARP14	Q460N5	1801 aa		13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	WDR33	Q9C0J8	1336 aa	Known RBP	13.44	□□□□□ -0.26
TAF1-218	ENST00000485087	TESPA1	A2RU30	521 aa	Predicted RBP	13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	MANSC4	A6NHS7	340 aa	Predicted RBP	13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	PFKFB2	O60825	505 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	PPFIA3	O75145	1194 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	CALM1	P0DP23	149 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	CALM2	P0DP24	149 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	CALM3	P0DP25	149 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	ST3GAL1	Q11201	340 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	SCRN1	Q12765	414 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	RTN1	Q16799	776 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	SLC35G1	Q2M3R5	365 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	CATSPERG	Q6ZRH7	1159 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	CCDC82	Q8N4S0	544 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	CTCFL	Q8NI51	663 aa	Predicted RBP	13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	TMX3	Q96JJ7	454 aa		13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	SLK	Q9H2G2	1235 aa	Predicted RBP	13.43	□□□□□ -0.26
TAF1-218	ENST00000485087	KLRF2	D3W0D1	207 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	IK	Q13123	557 aa	Predicted RBP	13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	NOG	Q13253	232 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	ASPRV1	Q53RT3	343 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	SRBD1	Q8N5C6	995 aa	Known RBP	13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	MAP3K14	Q99558	947 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	SMCHD1	A6NHR9	2005 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L15	C9J2P7	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L13	C9JLJ4	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L11	C9JVI0	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L18	D6R9N7	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L22	D6RA61	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L17	D6RBQ6	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L19	D6RCP7	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L20	D6RJB6	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	PDHX	O00330	501 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	FLOT1	O75955	427 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	HOXA7	P31268	230 aa	Predicted RBP	13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	MCM2	P49736	904 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	RCAN1	P53805	252 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	SNAP25	P60880	206 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	USP17L24	Q0WX57	530 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	GPATCH4	Q5T3I0	446 aa	Known RBP	13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	CCDC83	Q8IWF9	413 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	IL27	Q8NEV9	243 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	SNX21	Q969T3	373 aa		13.42	□□□□□ -0.26
TAF1-218	ENST00000485087	NID2	Q14112	1375 aa		13.41	□□□□□ -0.26
TAF1-218	ENST00000485087	CYTH3	O43739	400 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms