RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 STAG1Q8WVM7 1258 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 TMEM87BQ96K49 555 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■□□□ 11.7
RXRA-203ENST00000484822 CDK12Q9NYV4 1490 aaPredicted RBP16.74■□□□□ 0.27
RXRA-203ENST00000484822 GSPT1P15170 499 aaKnown RBP16.74■□□□□ 0.27
RXRA-203ENST00000484822 ARHGEF6Q15052 776 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 ADALQ6DHV7 355 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 PICK1Q9NRD5 415 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 KCNJ14Q9UNX9 436 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 AGTPBP1Q9UPW5 1226 aa16.74■□□□□ 0.27
RXRA-203ENST00000484822 PFKFB1P16118 471 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 OR8K1Q8NGG5 319 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 SESN3P58005 492 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 E2F5Q15329 346 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 GPR162Q16538 588 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 RBM26Q5T8P6 1007 aaKnown RBP16.73■□□□□ 0.27
RXRA-203ENST00000484822 PLCB1Q9NQ66 1216 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 TMOD4Q9NZQ9 345 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
RXRA-203ENST00000484822 CDC42BPBQ9Y5S2 1711 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 SNCBQ16143 134 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 KSR1Q8IVT5 923 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 GJA3Q9Y6H8 435 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 ZNF335Q9H4Z2 1342 aaPredicted RBP16.73■□□□□ 0.27
RXRA-203ENST00000484822 ZNF827Q17R98 1081 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 MAK16Q9BXY0 300 aaKnown RBP16.73■□□□□ 0.27
RXRA-203ENST00000484822 KLHL14Q9P2G3 628 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 ZWINTO95229 277 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 TXKP42681 527 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 MYSM1Q5VVJ2 828 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 RABGGTAQ92696 567 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 EPSTI1Q96J88 318 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 ZNF594Q96JF6 807 aaPredicted RBP16.73■□□□□ 0.27
RXRA-203ENST00000484822 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
RXRA-203ENST00000484822 SPHKAPQ2M3C7 1700 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 DPY19L2Q6NUT2 758 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 SPATS2Q86XZ4 545 aaKnown RBP16.72■□□□□ 0.27
RXRA-203ENST00000484822 RASSF2P50749 326 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 PTPROQ16827 1216 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 LONRF2Q1L5Z9 754 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 CCDC51Q96ER9 411 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 GEN1Q17RS7 908 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 TRIM58Q8NG06 486 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 APPBP2Q92624 585 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 PPP1R13BQ96KQ4 1090 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 FAN1Q9Y2M0 1017 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 GMNNO75496 209 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 IFT88Q13099 833 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 CEP128Q6ZU80 1094 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 RNF168Q8IYW5 571 aaPredicted RBP16.72■□□□□ 0.27
RXRA-203ENST00000484822 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
RXRA-203ENST00000484822 RASA3Q14644 834 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 CCDC14Q49A88 953 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 GSDMBQ8TAX9 411 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
RXRA-203ENST00000484822 FLOT1O75955 427 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 BIRC3Q13489 604 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 SFMBT2Q5VUG0 894 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 CCDC84Q86UT8 332 aaPredicted RBP16.71■□□□□ 0.27
RXRA-203ENST00000484822 UHMK1Q8TAS1 419 aaKnown RBP16.71■□□□□ 0.27
RXRA-203ENST00000484822 JRKLQ9Y4A0 524 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
RXRA-203ENST00000484822 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
RXRA-203ENST00000484822 PRDM1O75626 825 aa16.71■□□□□ 0.26
RXRA-203ENST00000484822 ALDH1B1P30837 517 aa16.71■□□□□ 0.26
RXRA-203ENST00000484822 USP44Q9H0E7 712 aa16.71■□□□□ 0.26
RXRA-203ENST00000484822 TBC1D7Q9P0N9 293 aa16.71■□□□□ 0.26
RXRA-203ENST00000484822 SETSIPP0DME0 302 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 RASIP1Q5U651 963 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 PHLDB3Q6NSJ2 640 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 KBTBD3Q8NAB2 608 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 CCNT1O60563 726 aaKnown RBP16.7■□□□□ 0.26
RXRA-203ENST00000484822 HYOU1Q9Y4L1 999 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 KCNK3O14649 394 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 HOMER3Q9NSC5 361 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 I3L4J1 428 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 OPHN1O60890 802 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 HERC4Q5GLZ8 1057 aaPredicted RBP16.7■□□□□ 0.26
RXRA-203ENST00000484822 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 KIFAP3Q92845 792 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 RILPQ96NA2 401 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 RAB17Q9H0T7 212 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 DPH5Q9H2P9 285 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
RXRA-203ENST00000484822 JAG2Q9Y219 1238 aa16.7■□□□□ 0.26
RXRA-203ENST00000484822 hCG_1642624A0A1W2PR95 340 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 GPAA1O43292 621 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 MSANTD4Q8NCY6 345 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 TM6SF1Q9BZW5 370 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 BUB1O43683 1085 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 MAP7Q14244 749 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 LOC102724428A0A0B4J2F2 783 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 BAG2O95816 211 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms