RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-210	ENST00000484752	SPDYE5	A6NIY4	337 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	TRIM75P	A6NK02	468 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	KIF3C	O14782	793 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	WDR46	O15213	610 aa	Known RBP	13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	DEXI	O95424	95 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	FMNL1	O95466	1100 aa	Predicted RBP	13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	CDC27	P30260	824 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	FSTL1	Q12841	308 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	SPP2	Q13103	211 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	PPIL2	Q13356	520 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	MTMR2	Q13614	643 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	ZYX	Q15942	572 aa	Known RBP	13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	LDLRAD1	Q5T700	205 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	DLK2	Q6UY11	383 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	SIAH1	Q8IUQ4	282 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	SMARCC2	Q8TAQ2	1214 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	ACER1	Q8TDN7	264 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	CHURC1	Q8WUH1	139 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	RRP36	Q96EU6	259 aa	Known RBP	13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	SPZ1	Q9BXG8	430 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	SLC26A6	Q9BXS9	759 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	ORC3	Q9UBD5	711 aa	Predicted RBP	13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	POLR2A	P24928	1970 aa	Known RBP	13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	ATAD5	Q96QE3	1844 aa		13.43	□□□□□ -0.26
RFTN1-210	ENST00000484752	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752		A0A1W2PRG0	241 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	UBE2Q2L	H0YL09	131 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	CXCL11	O14625	94 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	ITGBL1	O95965	494 aa	Predicted RBP	13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	STAT2	P52630	851 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	C1QTNF8	P60827	252 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	NUCB2	P80303	420 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	ST3GAL1	Q11201	340 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	TRAF1	Q13077	416 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	FAM160B2	Q86V87	743 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	DDX11	Q96FC9	970 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	OTUD5	Q96G74	571 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	GPCPD1	Q9NPB8	672 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	FEM1B	Q9UK73	627 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752	AFG3L2	Q9Y4W6	797 aa		13.42	□□□□□ -0.26
RFTN1-210	ENST00000484752		H3BQV1	296 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	hCG_1984214	I3L0E3	225 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	PRPF3	O43395	683 aa	Known RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	PLEKHA8P1	O95397	391 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	GOLGA8H	P0CJ92	632 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	NTRK3	Q16288	839 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	IFFO2	Q5TF58	517 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	LARP1B	Q659C4	914 aa	Known RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	KCTD1	Q719H9	257 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	FASTKD5	Q7L8L6	764 aa	Known RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	CCDC84	Q86UT8	332 aa	Predicted RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	SPICE1	Q8N0Z3	855 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	CCDC82	Q8N4S0	544 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	ZNF713	Q8N859	430 aa	Predicted RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	RGS22	Q8NE09	1264 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	PHKB	Q93100	1093 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	OPTN	Q96CV9	577 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	C12orf42	Q96LP6	360 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	TANGO6	Q9C0B7	1094 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	MYH4	Q9Y623	1939 aa		13.41	□□□□□ -0.26
RFTN1-210	ENST00000484752	CNTNAP5	Q8WYK1	1306 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	TMEM232	C9JQI7	657 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	JAK2	O60674	1132 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	PLA2G6	O60733	806 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	CTDNEP1	O95476	244 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	HMGCS2	P54868	508 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	HUNK	P57058	714 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	SNAPC2	Q13487	334 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	SH3D19	Q5HYK7	790 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	FAM83B	Q5T0W9	1011 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	MOB2	Q70IA6	237 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	FAM177A1	Q8N128	213 aa	Predicted RBP	13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	STAG2	Q8N3U4	1231 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	SRBD1	Q8N5C6	995 aa	Known RBP	13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	CLMN	Q96JQ2	1002 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	C8orf76	Q96K31	380 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	CHMP5	Q9NZZ3	219 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	PNMA2	Q9UL42	364 aa		13.4	□□□□□ -0.26
RFTN1-210	ENST00000484752	PASK	Q96RG2	1323 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	WDR33	Q9C0J8	1336 aa	Known RBP	13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	ZBTB48	P10074	688 aa	Predicted RBP	13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	FDX1	P10109	184 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	VCAM1	P19320	739 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	GTF2A2	P52657	109 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	SAFB	Q15424	915 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	SYDE2	Q5VT97	1194 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	NBPF11	Q86T75	865 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	CCDC148	Q8NFR7	591 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	ALG1	Q9BT22	464 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	RIOX1	Q9H6W3	641 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	BRMS1	Q9HCU9	246 aa		13.39	□□□□□ -0.27
RFTN1-210	ENST00000484752	KCNH4	Q9UQ05	1017 aa		13.39	□□□□□ -0.27

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