RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 ERVK-24P63145 666 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 CCNA1P78396 465 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 SLFN13Q68D06 897 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 CHURC1Q8WUH1 139 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
HDLBP-240ENST00000484412 MCOLN1Q9GZU1 580 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 PPP1R9AQ9ULJ8 1098 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 NEDD4P46934 1319 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 B4E1Z4 1266 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 SLC27A2O14975 620 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 STRNO43815 780 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 NMT2O60551 498 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 REC8O95072 547 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 OAZ1P54368 228 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 SEC23AQ15436 765 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 RRP12Q5JTH9 1297 aaKnown RBP16.43■□□□□ 0.22
HDLBP-240ENST00000484412 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDLBP-240ENST00000484412 FAM160B2Q86V87 743 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 TMTC2Q8N394 836 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 PXYLP1Q8TE99 480 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
HDLBP-240ENST00000484412 VWA5AO00534 786 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 FLOT1O75955 427 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 SLC25A27O95847 323 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 HSPA4P34932 840 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 CREB3L3Q68CJ9 461 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 REPS2Q8NFH8 660 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 USP6NLQ92738 828 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 BTBD7Q9P203 1132 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
HDLBP-240ENST00000484412 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
HDLBP-240ENST00000484412 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
HDLBP-240ENST00000484412 CAPN2P17655 700 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 COPB2P35606 906 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 SLC1A4P43007 532 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 STOX1Q6ZVD7 989 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
HDLBP-240ENST00000484412 TNS4Q8IZW8 715 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 ABRAQ8N0Z2 381 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 FBXL16Q8N461 479 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 IGDCC4Q8TDY8 1250 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 COA7Q96BR5 231 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 SLF1Q9BQI6 1058 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 MAF1Q9H063 256 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 WDR19Q8NEZ3 1342 aa16.41■□□□□ 0.22
HDLBP-240ENST00000484412 PARP14Q460N5 1801 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 PDHBP11177 359 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 MCCP23508 829 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 LIFRP42702 1097 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 KRT32Q14532 448 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 GPATCH4Q5T3I0 446 aaKnown RBP16.4■□□□□ 0.22
HDLBP-240ENST00000484412 RIOX2Q8IUF8 465 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
HDLBP-240ENST00000484412 ATG4CQ96DT6 458 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 TMEM87BQ96K49 555 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 USP26Q9BXU7 913 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 TANGO6Q9C0B7 1094 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 SPATC1LQ9H0A9 340 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 MROH8Q9H579 483 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 SLC38A10Q9HBR0 1119 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 PNMA2Q9UL42 364 aa16.4■□□□□ 0.22
HDLBP-240ENST00000484412 ZNF214Q9UL59 606 aaPredicted RBP16.4■□□□□ 0.22
HDLBP-240ENST00000484412 HOXC6P09630 235 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 STAT2P52630 851 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 TMEM132BQ14DG7 1078 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 MORN1Q5T089 497 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 CYB5R4Q7L1T6 521 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
HDLBP-240ENST00000484412 ARMC5Q96C12 935 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 ARHGAP39Q9C0H5 1083 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 MGAMO43451 1857 aa16.39■□□□□ 0.21
HDLBP-240ENST00000484412 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 TNPO2O14787 897 aaKnown RBP16.38■□□□□ 0.21
HDLBP-240ENST00000484412 ZBED4O75132 1171 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 IGHA2P01877 340 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 HMGB1P09429 215 aaKnown RBP16.38■□□□□ 0.21
HDLBP-240ENST00000484412 ZKSCAN1P17029 563 aaPredicted RBP16.38■□□□□ 0.21
HDLBP-240ENST00000484412 PTPREP23469 700 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 SMARCA1P28370 1054 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 MCM5P33992 734 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 STAT3P40763 770 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 EXOSC10Q01780 885 aaKnown RBP16.38■□□□□ 0.21
HDLBP-240ENST00000484412 ZNF543Q08ER8 600 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
HDLBP-240ENST00000484412 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 UBAC1Q9BSL1 405 aa16.38■□□□□ 0.21
HDLBP-240ENST00000484412 MOV10L1Q9BXT6 1211 aaKnown RBP16.38■□□□□ 0.21
HDLBP-240ENST00000484412 FBXO28Q9NVF7 368 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms