RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 PCDHB12Q9Y5F1 795 aa3.21□□□□□ -1.9
ABCA4-206ENST00000484388 FHOD1Q9Y613 1164 aa3.21□□□□□ -1.9
ABCA4-206ENST00000484388 DNAJC25-GNG10A0A024R161 153 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 IGF2BP3O00425 579 aaKnown RBP eCLIP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 NOP56O00567 594 aaKnown RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 PPP1R12AO14974 1030 aaPredicted RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 LEFTY1O75610 366 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 RFPL3O75679 317 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 ASMTLO95671 621 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 ITGAVP06756 1048 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 FGFR1P11362 822 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 GYS2P54840 703 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 GRB10Q13322 594 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 GPAT2Q6NUI2 795 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 POMZP3Q6PJE2 187 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 ADAT2Q7Z6V5 191 aaKnown RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 ZAR1Q86SH2 424 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 CD163Q86VB7 1156 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 ZNF227Q86WZ6 799 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 TRIM59Q8IWR1 403 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 SCUBE1Q8IWY4 988 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 TOP6BLQ8N6T0 577 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 LRRN4CLQ8ND94 238 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 ZCRB1Q8TBF4 217 aaKnown RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 FGD4Q96M96 766 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 AARSD1Q9BTE6 412 aaKnown RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 DHRS4Q9BTZ2 278 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 KCNF1Q9H3M0 494 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 SPC25Q9HBM1 224 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 CWC22Q9HCG8 908 aaKnown RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 PRDM5Q9NQX1 630 aaPredicted RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 FAM86C1Q9NVL1 165 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 APEX2Q9UBZ4 518 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 KCNH3Q9ULD8 1083 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 TPX2Q9ULW0 747 aaKnown RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 AKT3Q9Y243 479 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 PLAAQ9Y263 795 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 DIS3Q9Y2L1 958 aaKnown RBP3.2□□□□□ -1.9
ABCA4-206ENST00000484388 EMC9Q9Y3B6 208 aa3.2□□□□□ -1.9
ABCA4-206ENST00000484388 TRBV23-1A0A0A0MS06 115 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 C1QTNF9BB2RNN3 333 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 PLD2O14939 933 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 SIGLEC6O43699 453 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 DNAJC6O75061 913 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 LRRN2O75325 713 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 VIL1P09327 827 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 FAM87AP0C7U9 286 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 ZNF865P0CJ78 1059 aaPredicted RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 PABPC1P11940 636 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 CHRNA4P43681 627 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 ZNF445P59923 1031 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 PPP2R2AP63151 447 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 CYP27A1Q02318 531 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 PTPROQ16827 1216 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 TKFCQ3LXA3 575 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 FNDC3BQ53EP0 1204 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 DALRD3Q5D0E6 543 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 SFRP5Q5T4F7 317 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 FOXB2Q5VYV0 432 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 DTWD2Q8NBA8 298 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 PIWIL2Q8TC59 973 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 ENOX1Q8TC92 643 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 DCAF5Q96JK2 942 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 EXOC2Q96KP1 924 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 Q96M66 194 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 IPO9Q96P70 1041 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 MRPL4Q9BYD3 311 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 PRDM14Q9GZV8 571 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 C7orf69Q9H7B7 122 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 IFT57Q9NWB7 429 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 LRP2BPQ9P2M1 347 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 CGGBP1Q9UFW8 167 aaPredicted RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 GTF2IRD1Q9UHL9 959 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 FBXL21Q9UKT6 434 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 RAXQ9Y2V3 346 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 SUGT1Q9Y2Z0 365 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 MRPS23Q9Y3D9 190 aaKnown RBP3.19□□□□□ -1.9
ABCA4-206ENST00000484388 CNTNAP4Q9C0A0 1308 aa3.19□□□□□ -1.9
ABCA4-206ENST00000484388 PPM1GO15355 546 aaPredicted RBP3.18□□□□□ -1.9
ABCA4-206ENST00000484388 SCG5P05408 212 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 SRFP11831 508 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 IBSPP21815 317 aaPredicted RBP3.18□□□□□ -1.9
ABCA4-206ENST00000484388 HOXC12P31275 282 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 GATA4P43694 442 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 MASP1P48740 699 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 SUMO1P63165 101 aaKnown RBP3.18□□□□□ -1.9
ABCA4-206ENST00000484388 MAP4K2Q12851 820 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 CYP27C1Q4G0S4 372 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 TM4SF20Q53R12 229 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 FAM209AQ5JX71 171 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 NOL9Q5SY16 702 aaKnown RBP3.18□□□□□ -1.9
ABCA4-206ENST00000484388 RNF43Q68DV7 783 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 NSMFQ6X4W1 530 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 PRR23CQ6ZRP0 262 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 FILIP1Q7Z7B0 1213 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 FIBCD1Q8N539 461 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 NINJ1Q92982 152 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 OSBP2Q969R2 916 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 GPATCH3Q96I76 525 aa3.18□□□□□ -1.9
ABCA4-206ENST00000484388 CCDC140Q96MF4 163 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms