RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SRRTQ9BXP5 876 aaKnown RBP5.93□□□□□ -1.46
PTCD3-214ENST00000483925 PRDM5Q9NQX1 630 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-214ENST00000483925 PCDHA4Q9UN74 947 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 MSRB2Q9Y3D2 182 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 PITPNM2Q9BZ72 1349 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 CREB3O43889 395 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 PAGE1O75459 146 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 VIL1P09327 827 aaKnown RBP5.92□□□□□ -1.46
PTCD3-214ENST00000483925 RASGRF1Q13972 1273 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 CCDC85BQ15834 202 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-214ENST00000483925 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 LLGL2Q6P1M3 1020 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 KRT26Q7Z3Y9 468 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 IER2Q9BTL4 223 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 FOXQ1Q9C009 403 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 PPM1HQ9ULR3 514 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 MAPK8IP1Q9UQF2 711 aa5.92□□□□□ -1.46
PTCD3-214ENST00000483925 SUPT16HQ9Y5B9 1047 aaKnown RBP5.92□□□□□ -1.46
PTCD3-214ENST00000483925 KIF3BO15066 747 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 PDPK1O15530 556 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 LRIG2O94898 1065 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 RHBDL3P58872 404 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 TCEA2Q15560 299 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 CCSAPQ6IQ19 270 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-214ENST00000483925 ARMCX6Q7L4S7 300 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 ZNF507Q8TCN5 953 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 ELMO3Q96BJ8 720 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 LIN37Q96GY3 246 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-214ENST00000483925 SGSM3Q96HU1 749 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 KCNQ5Q9NR82 932 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 CYP8B1Q9UNU6 501 aa5.91□□□□□ -1.46
PTCD3-214ENST00000483925 SMAD7O15105 426 aaKnown RBP5.9□□□□□ -1.46
PTCD3-214ENST00000483925 FBXO24O75426 580 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 RAP1GAPP47736 663 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 EXOSC10Q01780 885 aaKnown RBP5.9□□□□□ -1.46
PTCD3-214ENST00000483925 OS9Q13438 667 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-214ENST00000483925 RALBP1Q15311 655 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 LCE4AQ5TA78 99 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 FYB2Q5VWT5 728 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 PCNX4Q63HM2 1172 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 CYFIP1Q7L576 1253 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 ANKRD24Q8TF21 1146 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 RPS6KC1Q96S38 1066 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 PPP1R16BQ96T49 567 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 KANSL2Q9H9L4 492 aa5.9□□□□□ -1.46
PTCD3-214ENST00000483925 FAM155AB1AL88 458 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-214ENST00000483925 SLITRK5O94991 958 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 GLI1P08151 1106 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 APOBRQ0VD83 1088 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 MPZL3Q6UWV2 235 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 SV2BQ7L1I2 683 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 APBB1IPQ7Z5R6 666 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-214ENST00000483925 THAP3Q8WTV1 239 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-214ENST00000483925 NKD1Q969G9 470 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 KIRREL1Q96J84 757 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 HSPA12BQ96MM6 686 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 TOX2Q96NM4 488 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 CRBNQ96SW2 442 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 CARS2Q9HA77 564 aaKnown RBP5.89□□□□□ -1.47
PTCD3-214ENST00000483925 SEMA3GQ9NS98 782 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 TPX2Q9ULW0 747 aaKnown RBP5.89□□□□□ -1.47
PTCD3-214ENST00000483925 PLAAQ9Y263 795 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 EID1Q9Y6B2 187 aa5.89□□□□□ -1.47
PTCD3-214ENST00000483925 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-214ENST00000483925 PLIN1O60240 522 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 GREM1O60565 184 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 EIF6P56537 245 aaKnown RBP5.88□□□□□ -1.47
PTCD3-214ENST00000483925 SQSTM1Q13501 440 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 INPP5AQ14642 412 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 DDR2Q16832 855 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 HSP90AB4PQ58FF6 505 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 TMEM67Q5HYA8 995 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 SFRP5Q5T4F7 317 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 RASIP1Q5U651 963 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 CDKAL1Q5VV42 579 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 FBXL19Q6PCT2 694 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 TSHZ1Q6ZSZ6 1077 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 HDXQ7Z353 690 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 SHDQ96IW2 340 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 ACTR10Q9NZ32 417 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
PTCD3-214ENST00000483925 PRAMEF27A3QJZ7 478 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 ALG1L2C9J202 215 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 CAND2O75155 1236 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 TSPAN15O95858 294 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 ZNF865P0CJ78 1059 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-214ENST00000483925 CNGA1P29973 690 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 GDNFP39905 211 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 HDAC1Q13547 482 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-214ENST00000483925 FXNQ16595 210 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 MTERF2Q49AM1 385 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 SNAP47Q5SQN1 464 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 LRFN4Q6PJG9 635 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 PRR23BQ6ZRT6 265 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 C22orf34Q6ZV56 151 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 CILP2Q8IUL8 1156 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 SLITRK4Q8IW52 837 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms