RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 hCG_1984214I3L0E3 225 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 NLRP5P59047 1200 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 PTPAQ15257 358 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 NPY5RQ15761 445 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 SLC35G1Q2M3R5 365 aa30.16■■■□□ 2.42
SHOX2-204ENST00000483851 ZNF713Q8N859 430 aaPredicted RBP30.16■■■□□ 2.42
SHOX2-204ENST00000483851 BAZ2BQ9UIF8 2168 aaKnown RBP30.16■■■□□ 2.42
SHOX2-204ENST00000483851 TNNI2P48788 182 aa30.15■■■□□ 2.42
SHOX2-204ENST00000483851 NR5A1Q13285 461 aa30.15■■■□□ 2.42
SHOX2-204ENST00000483851 RBM26Q5T8P6 1007 aaKnown RBP30.15■■■□□ 2.42
SHOX2-204ENST00000483851 LRRC47Q8N1G4 583 aaKnown RBP30.15■■■□□ 2.42
SHOX2-204ENST00000483851 RRP36Q96EU6 259 aaKnown RBP30.15■■■□□ 2.42
SHOX2-204ENST00000483851 CCAR1Q8IX12 1150 aaKnown RBP30.14■■■□□ 2.42
SHOX2-204ENST00000483851 OXER1Q8TDS5 423 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 CCDC12Q8WUD4 166 aaPredicted RBP30.14■■■□□ 2.42
SHOX2-204ENST00000483851 TNFRSF25Q93038 417 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.14■■■□□ 2.42
SHOX2-204ENST00000483851 CABP5Q9NP86 173 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 BARHL2Q9NY43 387 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 CEP131Q9UPN4 1083 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 MTMR7Q9Y216 660 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 GOLGA8HP0CJ92 632 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 ZNF543Q08ER8 600 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 CCDC73Q6ZRK6 1079 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 NUP62CLQ9H1M0 184 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 VEZTQ9HBM0 779 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 DACT1Q9NYF0 836 aa30.14■■■□□ 2.42
SHOX2-204ENST00000483851 FAM196BA6NMK8 535 aa30.13■■■□□ 2.41
SHOX2-204ENST00000483851 TNFAIP1Q13829 316 aa30.13■■■□□ 2.41
SHOX2-204ENST00000483851 DAGLBQ8NCG7 672 aa30.13■■■□□ 2.41
SHOX2-204ENST00000483851 PDLIM2Q96JY6 352 aa30.13■■■□□ 2.41
SHOX2-204ENST00000483851 NOL7Q9UMY1 257 aaKnown RBP30.13■■■□□ 2.41
SHOX2-204ENST00000483851 TOB1P50616 345 aaPredicted RBP30.12■■■□□ 2.41
SHOX2-204ENST00000483851 PRELPP51888 382 aa30.12■■■□□ 2.41
SHOX2-204ENST00000483851 TPRNQ4KMQ1 711 aa30.12■■■□□ 2.41
SHOX2-204ENST00000483851 SEC63Q9UGP8 760 aaKnown RBP30.12■■■□□ 2.41
SHOX2-204ENST00000483851 DICER1Q9UPY3 1922 aaKnown RBP30.12■■■□□ 2.41
SHOX2-204ENST00000483851 EEF2P13639 858 aaKnown RBP30.12■■■□□ 2.41
SHOX2-204ENST00000483851 TRAPPC10P48553 1259 aa30.12■■■□□ 2.41
SHOX2-204ENST00000483851 DCAF4Q8WV16 495 aa30.12■■■□□ 2.41
SHOX2-204ENST00000483851 MRPS27Q92552 414 aaKnown RBP30.12■■■□□ 2.41
SHOX2-204ENST00000483851 TSPY26PQ9H489 355 aa30.12■■■□□ 2.41
SHOX2-204ENST00000483851 BMP15O95972 392 aa30.11■■■□□ 2.41
SHOX2-204ENST00000483851 MAP3K10Q02779 954 aa30.11■■■□□ 2.41
SHOX2-204ENST00000483851 ICA1Q05084 483 aa30.11■■■□□ 2.41
SHOX2-204ENST00000483851 FAM160A1Q05DH4 1040 aa30.11■■■□□ 2.41
SHOX2-204ENST00000483851 NBPF9Q3BBW0 867 aa30.11■■■□□ 2.41
SHOX2-204ENST00000483851 ANP32BQ92688 251 aaKnown RBP30.11■■■□□ 2.41
SHOX2-204ENST00000483851 CLSTN2Q9H4D0 955 aa30.11■■■□□ 2.41
SHOX2-204ENST00000483851 PCDHA4Q9UN74 947 aa30.11■■■□□ 2.41
SHOX2-204ENST00000483851 SLURP2P0DP57 97 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 GMPSP49915 693 aaPredicted RBP30.1■■■□□ 2.41
SHOX2-204ENST00000483851 CLEC10AQ8IUN9 316 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 NR1I2O75469 434 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 CMA1P23946 247 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 SEPT2Q15019 361 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 AXDND1Q5T1B0 1012 aaPredicted RBP30.1■■■□□ 2.41
SHOX2-204ENST00000483851 WWC2Q6AWC2 1192 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 BLIDQ8IZY5 108 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 GMCL1P1Q8NEA9 526 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 PGAP2Q9UHJ9 254 aa30.1■■■□□ 2.41
SHOX2-204ENST00000483851 STXBP3O00186 592 aa30.09■■■□□ 2.41
SHOX2-204ENST00000483851 RBM43Q6ZSC3 357 aaKnown RBP30.09■■■□□ 2.41
SHOX2-204ENST00000483851 ENGASEQ8NFI3 743 aa30.09■■■□□ 2.41
SHOX2-204ENST00000483851 PIBF1Q8WXW3 757 aa30.09■■■□□ 2.41
SHOX2-204ENST00000483851 CTAGE5O15320 804 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 VEGFAP15692 232 aaPredicted RBP30.08■■■□□ 2.41
SHOX2-204ENST00000483851 LMNB1P20700 586 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 ATP2B2Q01814 1243 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 FSIP1Q8NA03 581 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 CNOT7Q9UIV1 285 aaKnown RBP30.08■■■□□ 2.41
SHOX2-204ENST00000483851 CUTAO60888 179 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 MAP3K11Q16584 847 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 RASGRP2Q7LDG7 609 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 HEATR3Q7Z4Q2 680 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 SIAH1Q8IUQ4 282 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 MICALL2Q8IY33 904 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 GPKOWQ92917 476 aaPredicted RBP eCLIP30.08■■■□□ 2.41
SHOX2-204ENST00000483851 ZMYND12Q9H0C1 365 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 TNMDQ9H2S6 317 aa30.08■■■□□ 2.41
SHOX2-204ENST00000483851 ESYT2A0FGR8 921 aa30.07■■■□□ 2.4
SHOX2-204ENST00000483851 TRIM75PA6NK02 468 aa30.07■■■□□ 2.4
SHOX2-204ENST00000483851 GH2P01242 217 aa30.07■■■□□ 2.4
SHOX2-204ENST00000483851 FHDC1Q9C0D6 1143 aaPredicted RBP30.07■■■□□ 2.4
SHOX2-204ENST00000483851 FRMPD2Q68DX3 1309 aaPredicted RBP30.07■■■□□ 2.4
SHOX2-204ENST00000483851 GDF11O95390 407 aa30.06■■■□□ 2.4
SHOX2-204ENST00000483851 SNW1Q13573 536 aaKnown RBP30.06■■■□□ 2.4
SHOX2-204ENST00000483851 TMEM39BQ9GZU3 492 aa30.06■■■□□ 2.4
SHOX2-204ENST00000483851 GJA3Q9Y6H8 435 aa30.06■■■□□ 2.4
SHOX2-204ENST00000483851 GNA11P29992 359 aa30.06■■■□□ 2.4
SHOX2-204ENST00000483851 TRIM44Q96DX7 344 aaPredicted RBP30.06■■■□□ 2.4
SHOX2-204ENST00000483851 GMCL1Q96IK5 515 aa30.06■■■□□ 2.4
SHOX2-204ENST00000483851 GOLPH3LQ9H4A5 285 aa30.06■■■□□ 2.4
SHOX2-204ENST00000483851 FAM237AA0A1B0GTK4 181 aa30.05■■■□□ 2.4
SHOX2-204ENST00000483851 ESPNB1AK53 854 aa30.05■■■□□ 2.4
SHOX2-204ENST00000483851 M0R2N6 131 aa30.05■■■□□ 2.4
SHOX2-204ENST00000483851 CLCN1P35523 988 aa30.05■■■□□ 2.4
SHOX2-204ENST00000483851 SLFN13Q68D06 897 aa30.05■■■□□ 2.4
SHOX2-204ENST00000483851 ARHGAP27Q6ZUM4 889 aa30.05■■■□□ 2.4
SHOX2-204ENST00000483851 KRI1Q8N9T8 703 aaKnown RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms