RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 NLRC3Q7RTR2 1065 aa6.39□□□□□ -1.39
NSMCE4A-210ENST00000483541 LINC01599Q8WXQ3 324 aa6.39□□□□□ -1.39
NSMCE4A-210ENST00000483541 NKD1Q969G9 470 aa6.39□□□□□ -1.39
NSMCE4A-210ENST00000483541 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
NSMCE4A-210ENST00000483541 NSUN3Q9H649 340 aaKnown RBP6.39□□□□□ -1.39
NSMCE4A-210ENST00000483541 METTL5Q9NRN9 209 aaKnown RBP6.39□□□□□ -1.39
NSMCE4A-210ENST00000483541 NME1P15531 152 aaKnown RBP6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 MCM4P33991 863 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 ZNF76P36508 570 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 GK5Q6ZS86 529 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 CILP2Q8IUL8 1156 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 KIAA0825Q8IV33 1275 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 USHBP1Q8N6Y0 703 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 ANKS4BQ8N8V4 417 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 DIRC2Q96SL1 478 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 SPON2Q9BUD6 331 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 HDAC8Q9BY41 377 aa6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 CWC22Q9HCG8 908 aaKnown RBP6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 DCP1AQ9NPI6 582 aaPredicted RBP6.38□□□□□ -1.39
NSMCE4A-210ENST00000483541 NFIBO00712 420 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 TNFRSF10CO14798 259 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 CLEC3AO75596 197 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 IMPDH2P12268 514 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 TRHRP34981 398 aaPredicted RBP6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 INTS3Q68E01 1043 aaKnown RBP6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 ANKLE2Q86XL3 938 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 IRF2BP1Q8IU81 584 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 LINC00116Q8NCU8 138 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 EAF1Q96JC9 268 aaPredicted RBP6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 TOX2Q96NM4 488 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 SLC26A8Q96RN1 970 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 BACH2Q9BYV9 841 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 RNF32Q9H0A6 362 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 SLC6A17Q9H1V8 727 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 C19orf44Q9H6X5 657 aa6.37□□□□□ -1.39
NSMCE4A-210ENST00000483541 KRT1P04264 644 aa6.36□□□□□ -1.39
NSMCE4A-210ENST00000483541 TMEM253P0C7T8 217 aa6.36□□□□□ -1.39
NSMCE4A-210ENST00000483541 TCTN2Q96GX1 697 aa6.36□□□□□ -1.39
NSMCE4A-210ENST00000483541 DHRS1Q96LJ7 313 aa6.36□□□□□ -1.39
NSMCE4A-210ENST00000483541 G6PC3Q9BUM1 346 aa6.36□□□□□ -1.39
NSMCE4A-210ENST00000483541 YBX2Q9Y2T7 364 aaKnown RBP6.36□□□□□ -1.39
NSMCE4A-210ENST00000483541 SIGLEC6O43699 453 aa6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 GLDCP23378 1020 aa6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 POLR2BP30876 1174 aaKnown RBP6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 PCBP3P57721 371 aaKnown RBP6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 FANCCQ00597 558 aa6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 PRR13Q9NZ81 148 aa6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 EBF1Q9UH73 591 aa6.35□□□□□ -1.39
NSMCE4A-210ENST00000483541 C1QTNF9P0C862 333 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 VAMP1P23763 118 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 RPL10P27635 214 aaKnown RBP6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 KIR2DL1P43626 348 aaPredicted RBP6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 KIR2DL2P43627 348 aaPredicted RBP6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 TIGD5Q53EQ6 642 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 TMC3Q7Z5M5 1100 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 ZSCAN18Q8TBC5 510 aaPredicted RBP6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 PRDM14Q9GZV8 571 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 ANTXR1Q9H6X2 564 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 TCFL5Q9UL49 500 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 ZNRF3Q9ULT6 936 aa6.34□□□□□ -1.39
NSMCE4A-210ENST00000483541 SSU72P8A0A1W2PR75 194 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 PEX10O60683 326 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 ENDOUP21128 410 aaKnown RBP6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 CFPP27918 469 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 MFAP1P55081 439 aaKnown RBP6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 TMEM192Q8IY95 271 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 KCNN1Q92952 543 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 RNF34Q969K3 372 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 INTS4Q96HW7 963 aaKnown RBP6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 SLC9A7Q96T83 725 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 FOXP3Q9BZS1 431 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 ZMYM5Q9UJ78 669 aa6.33□□□□□ -1.4
NSMCE4A-210ENST00000483541 TMEM82A0PJX8 343 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 NOTOA8MTQ0 251 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 PRAMEF1O95521 474 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 SNW1Q13573 536 aaKnown RBP6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 WAPLQ7Z5K2 1190 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 MAP6Q96JE9 813 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 SLC6A18Q96N87 628 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 ZNF552Q9H707 407 aaPredicted RBP6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 CHST7Q9NS84 486 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 GPR160Q9UJ42 338 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 PCDHB12Q9Y5F1 795 aa6.32□□□□□ -1.4
NSMCE4A-210ENST00000483541 ETV2O00321 342 aaPredicted RBP6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 NRDCO43847 1150 aa6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 PSPNO60542 156 aa6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 SYPP08247 313 aa6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 AUHQ13825 339 aaKnown RBP6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 SLC14A2Q15849 920 aa6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 BBS9Q3SYG4 887 aa6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 ATG14Q6ZNE5 492 aa6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 LRRC56Q8IYG6 542 aaPredicted RBP6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 RBBP8NLQ8NC74 664 aaPredicted RBP6.31□□□□□ -1.4
NSMCE4A-210ENST00000483541 TM9SF2Q99805 663 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms