RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 GOLGA8HP0CJ92 632 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 ASPRV1Q53RT3 343 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 METTL16Q86W50 562 aaKnown RBP15.16■□□□□ 0.02
CPNE1-225ENST00000483495 FERMT2Q96AC1 680 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 RIOX1Q9H6W3 641 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 DNAJC18Q9H819 358 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 PI4KBQ9UBF8 816 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-225ENST00000483495 USP17L5A8MUK1 530 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 ADAMTS3O15072 1205 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 ATP2B1P20020 1258 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 RBM5P52756 815 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■■■□□ 15.7
CPNE1-225ENST00000483495 ATP2C1P98194 919 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-225ENST00000483495 KRBA2Q6ZNG9 492 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 PIK3AP1Q6ZUJ8 805 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 RASGRP2Q7LDG7 609 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 ERCC4Q92889 916 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-225ENST00000483495 BPIFA3Q9BQP9 254 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 PSME4Q14997 1843 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
CPNE1-225ENST00000483495 DDTLA6NHG4 134 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-225ENST00000483495 ENTPD3O75355 529 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 CACNB3P54284 484 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 LONRF3Q496Y0 759 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 SH3BP5LQ7L8J4 393 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 CEP57L1Q8IYX8 460 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 RRP36Q96EU6 259 aaKnown RBP15.14■□□□□ 0.01
CPNE1-225ENST00000483495 ZMYND12Q9H0C1 365 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 CSRNP2Q9H175 543 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 BAZ2BQ9UIF8 2168 aaKnown RBP15.14■□□□□ 0.01
CPNE1-225ENST00000483495 MTMR7Q9Y216 660 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 SIPA1L1O43166 1804 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 VIL1P09327 827 aaKnown RBP15.14■□□□□ 0.01
CPNE1-225ENST00000483495 NLRP12P59046 1061 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 SOGA3Q5TF21 947 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 TATDN1Q6P1N9 297 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 HEATR3Q7Z4Q2 680 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 FOXP4Q8IVH2 680 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-225ENST00000483495 CCDC12Q8WUD4 166 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-225ENST00000483495 GMLQ99445 158 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 NAT10Q9H0A0 1025 aaKnown RBP15.14■□□□□ 0.01
CPNE1-225ENST00000483495 CLIP2Q9UDT6 1046 aa15.14■□□□□ 0.01
CPNE1-225ENST00000483495 hCG_1984214I3L0E3 225 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 CLCN1P35523 988 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 MDM2Q00987 491 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-225ENST00000483495 TCP10Q12799 353 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 ZNF174Q15697 407 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 SPECC1Q5M775 1068 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 RSBN1LQ6PCB5 846 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-225ENST00000483495 CCDC125Q86Z20 511 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 DHX40Q8IX18 779 aaKnown RBP15.13■□□□□ 0.01
CPNE1-225ENST00000483495 ZNF713Q8N859 430 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-225ENST00000483495 CNNM3Q8NE01 707 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
CPNE1-225ENST00000483495 MYH8P13535 1937 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 TGFB2P61812 414 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 PTGDRQ13258 359 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 SARM1Q6SZW1 724 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 LRRC47Q8N1G4 583 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 CPVLQ9H3G5 476 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 SEC63Q9UGP8 760 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 COL4A5P29400 1685 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 A0A087WWV3 80 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 ESYT2A0FGR8 921 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 ZRSR1Q15695 479 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 DPCR1Q3MIW9 517 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 ARL6IP4Q66PJ3 421 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 CLEC10AQ8IUN9 316 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 LARGE2Q8N3Y3 721 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 MKL1Q969V6 931 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 PRMT6Q96LA8 375 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 TDRD3Q9H7E2 651 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 HOOK1Q9UJC3 728 aaKnown RBP15.12■□□□□ 0.01
CPNE1-225ENST00000483495 ZKSCAN5Q9Y2L8 839 aa15.12■□□□□ 0.01
CPNE1-225ENST00000483495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-225ENST00000483495 CCDC194A0A1B0GVG4 234 aa15.11■□□□□ 0.01
CPNE1-225ENST00000483495 GOLGA6L19H0YKK7 550 aa15.11■□□□□ 0.01
CPNE1-225ENST00000483495 POLR2DO15514 142 aaKnown RBP15.11■□□□□ 0.01
CPNE1-225ENST00000483495 EIF6P56537 245 aaKnown RBP15.11■□□□□ 0.01
CPNE1-225ENST00000483495 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
CPNE1-225ENST00000483495 CERKLQ49MI3 558 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-225ENST00000483495 GPATCH4Q5T3I0 446 aaKnown RBP15.11■□□□□ 0.01
CPNE1-225ENST00000483495 PLA2G4DQ86XP0 818 aa15.11■□□□□ 0.01
CPNE1-225ENST00000483495 C4orf32Q8N8J7 132 aa15.11■□□□□ 0.01
CPNE1-225ENST00000483495 PIGSQ96S52 555 aa15.11■□□□□ 0.01
CPNE1-225ENST00000483495 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-225ENST00000483495 NYAP2Q9P242 653 aa15.11■□□□□ 0.01
CPNE1-225ENST00000483495 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
CPNE1-225ENST00000483495 PSMD14O00487 310 aa15.1■□□□□ 0.01
CPNE1-225ENST00000483495 ACTN4O43707 911 aaKnown RBP15.1■□□□□ 0.01
CPNE1-225ENST00000483495 PTMAP06454 111 aaKnown RBP15.1■□□□□ 0.01
CPNE1-225ENST00000483495 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
CPNE1-225ENST00000483495 GNA11P29992 359 aa15.1■□□□□ 0.01
CPNE1-225ENST00000483495 NAPAP54920 295 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms