RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ARPP21Q9UBL0 812 aaPredicted RBP11.38□□□□□ -0.59
HMG20B-210ENST00000483417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
HMG20B-210ENST00000483417 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 RLFQ13129 1914 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 NMT2O60551 498 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 HMGCRP04035 888 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 EEF2P13639 858 aaKnown RBP11.37□□□□□ -0.59
HMG20B-210ENST00000483417 PTPREP23469 700 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 DSG3P32926 999 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
HMG20B-210ENST00000483417 TFAP4Q01664 338 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 CREB3L3Q68CJ9 461 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 CASC1Q6TDU7 716 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 PLEKHH3Q7Z736 793 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 SOCS4Q8WXH5 440 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 LPAR1Q92633 364 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMG20B-210ENST00000483417 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 KANSL2Q9H9L4 492 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 MKNK2Q9HBH9 465 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 ADAMTS5Q9UNA0 930 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
HMG20B-210ENST00000483417 PDE4DIPQ5VU43 2346 aa11.37□□□□□ -0.59
HMG20B-210ENST00000483417 IGKV6D-41A0A0C4DH26 115 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 TFRCP02786 760 aaKnown RBP11.36□□□□□ -0.59
HMG20B-210ENST00000483417 HOXC6P09630 235 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 ICA1Q05084 483 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 CCL14Q16627 93 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 ADCK5Q3MIX3 580 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
HMG20B-210ENST00000483417 AKNAD1Q5T1N1 836 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 CYB5R4Q7L1T6 521 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 AMOTL1Q8IY63 956 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 ZNF444Q8N0Y2 327 aaPredicted RBP11.36□□□□□ -0.59
HMG20B-210ENST00000483417 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
HMG20B-210ENST00000483417 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 ZSWIM5Q9P217 1185 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 ROBO3Q96MS0 1386 aa11.36□□□□□ -0.59
HMG20B-210ENST00000483417 NEDD4P46934 1319 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 B4E1Z4 1266 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 E7EWF7 191 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 H0YGN5 161 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
HMG20B-210ENST00000483417 RGS2P41220 211 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 CCNA1P78396 465 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 CACNB2Q08289 660 aaPredicted RBP11.35□□□□□ -0.59
HMG20B-210ENST00000483417 GRB14Q14449 540 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 IMMTQ16891 758 aaKnown RBP11.35□□□□□ -0.59
HMG20B-210ENST00000483417 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 CHST3Q7LGC8 479 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
HMG20B-210ENST00000483417 SPICE1Q8N0Z3 855 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 KCNB2Q92953 911 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 MOV10L1Q9BXT6 1211 aaKnown RBP11.35□□□□□ -0.59
HMG20B-210ENST00000483417 FLRT1Q9NZU1 646 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 OGDHLQ9ULD0 1010 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
HMG20B-210ENST00000483417 WDR46O15213 610 aaKnown RBP11.34□□□□□ -0.59
HMG20B-210ENST00000483417 ORC4O43929 436 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
HMG20B-210ENST00000483417 CPA1P15085 419 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 HSPA4P34932 840 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 PDE4BQ07343 736 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 LHX8Q68G74 356 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 CCAR1Q8IX12 1150 aaKnown RBP11.34□□□□□ -0.59
HMG20B-210ENST00000483417 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 NEDD1Q8NHV4 660 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 MKL1Q969V6 931 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 CHMP4CQ96CF2 233 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
HMG20B-210ENST00000483417 TANGO6Q9C0B7 1094 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 SPATC1LQ9H0A9 340 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 SH2D4AQ9H788 454 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 GPHNQ9NQX3 736 aaPredicted RBP11.34□□□□□ -0.59
HMG20B-210ENST00000483417 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 FBXO28Q9NVF7 368 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 NYAP2Q9P242 653 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 SNX14Q9Y5W7 946 aa11.34□□□□□ -0.59
HMG20B-210ENST00000483417 GREB1LQ9C091 1923 aaPredicted RBP11.34□□□□□ -0.59
HMG20B-210ENST00000483417 A0A0G2JMZ2 1700 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 F5H6K3 240 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 STRNO43815 780 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 KDM4AO75164 1064 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 FLOT1O75955 427 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
HMG20B-210ENST00000483417 ZKSCAN1P17029 563 aaPredicted RBP11.33□□□□□ -0.6
HMG20B-210ENST00000483417 KLRC3Q07444 240 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 TMEM132BQ14DG7 1078 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
HMG20B-210ENST00000483417 MB21D1Q8N884 522 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 REPS2Q8NFH8 660 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms