RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
VARS-226ENST00000483275 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
VARS-226ENST00000483275 HAUS7Q99871 368 aa16.76■□□□□ 0.27
VARS-226ENST00000483275 DDX19BQ9UMR2 479 aa16.76■□□□□ 0.27
VARS-226ENST00000483275 SLC4A4Q9Y6R1 1079 aa16.76■□□□□ 0.27
VARS-226ENST00000483275 PRUNE2Q8WUY3 3088 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 KBTBD13C9JR72 458 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 ATP5JP18859 108 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 TSHZ3Q63HK5 1081 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 GPR153Q6NV75 609 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 MAML3Q96JK9 1138 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
VARS-226ENST00000483275 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■□□ 19.1
VARS-226ENST00000483275 PUS7LQ9H0K6 701 aaKnown RBP16.75■□□□□ 0.27
VARS-226ENST00000483275 ATP8A2Q9NTI2 1148 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 CDH23Q9H251 3354 aa16.75■□□□□ 0.27
VARS-226ENST00000483275 WDR46O15213 610 aaKnown RBP16.74■□□□□ 0.27
VARS-226ENST00000483275 SEPT4O43236 478 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 TAL1P17542 331 aaPredicted RBP16.74■□□□□ 0.27
VARS-226ENST00000483275 ADCYAP1R1P41586 468 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 FAM83BQ5T0W9 1011 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 CTR9Q6PD62 1173 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 SH3RF1Q7Z6J0 888 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 MB21D1Q8N884 522 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 GUCD1Q96NT3 240 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 MROH8Q9H579 483 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 STXBP5LQ9Y2K9 1186 aa16.74■□□□□ 0.27
VARS-226ENST00000483275 STRNO43815 780 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 FCER1AP12319 257 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 LRRC41Q15345 812 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 C9orf50Q5SZB4 431 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 SLC39A5Q6ZMH5 540 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 MMP19Q99542 508 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 SH2D4AQ9H788 454 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 PRKAG2Q9UGJ0 569 aa16.73■□□□□ 0.27
VARS-226ENST00000483275 MS4A1P11836 297 aa16.72■□□□□ 0.27
VARS-226ENST00000483275 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
VARS-226ENST00000483275 ARRDC4Q8NCT1 418 aa16.72■□□□□ 0.27
VARS-226ENST00000483275 BADQ92934 168 aa16.72■□□□□ 0.27
VARS-226ENST00000483275 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
VARS-226ENST00000483275 PDLIM7Q9NR12 457 aa16.72■□□□□ 0.27
VARS-226ENST00000483275 TRIM43BA6NCK2 446 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 VWA5AO00534 786 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 PGK1P00558 417 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 SLC4A3P48751 1232 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 UBE3CQ15386 1083 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 SHHQ15465 462 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 ABRAQ8N0Z2 381 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 TRIM43Q96BQ3 446 aaPredicted RBP16.71■□□□□ 0.27
VARS-226ENST00000483275 CCDC17Q96LX7 622 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 ZNF214Q9UL59 606 aaPredicted RBP16.71■□□□□ 0.27
VARS-226ENST00000483275 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
VARS-226ENST00000483275 REPS2Q8NFH8 660 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 KANSL2Q9H9L4 492 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 GOPCQ9HD26 462 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 SLC5A4Q9NY91 659 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 VCANP13611 3396 aa16.7■□□□□ 0.26
VARS-226ENST00000483275 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
VARS-226ENST00000483275 RASA1P20936 1047 aa16.69■□□□□ 0.26
VARS-226ENST00000483275 ITGB8P26012 769 aa16.69■□□□□ 0.26
VARS-226ENST00000483275 KCTD2Q14681 263 aa16.69■□□□□ 0.26
VARS-226ENST00000483275 SNX17Q15036 470 aa16.69■□□□□ 0.26
VARS-226ENST00000483275 RIOX2Q8IUF8 465 aa16.69■□□□□ 0.26
VARS-226ENST00000483275 STRBPQ96SI9 672 aaKnown RBP16.69■□□□□ 0.26
VARS-226ENST00000483275 EPB41L4AQ9HCS5 686 aaPredicted RBP16.69■□□□□ 0.26
VARS-226ENST00000483275 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
VARS-226ENST00000483275 GSG1L2A8MUP6 293 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 PRDM1O75626 825 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 SLC25A27O95847 323 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 NDUFB10O96000 172 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 RARBP10826 455 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 STAT3P40763 770 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
VARS-226ENST00000483275 TLE2Q04725 743 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 ZNF792Q3KQV3 632 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 OSBP2Q969R2 916 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 TINF2Q9BSI4 451 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 ARPP21Q9UBL0 812 aaPredicted RBP16.68■□□□□ 0.26
VARS-226ENST00000483275 RIPK3Q9Y572 518 aa16.68■□□□□ 0.26
VARS-226ENST00000483275 M0R2C6 588 aa16.67■□□□□ 0.26
VARS-226ENST00000483275 PQBP1O60828 265 aaKnown RBP16.67■□□□□ 0.26
VARS-226ENST00000483275 EPHB4P54760 987 aa16.67■□□□□ 0.26
VARS-226ENST00000483275 SNRNP48Q6IEG0 339 aaKnown RBP16.67■□□□□ 0.26
VARS-226ENST00000483275 ECHDC1Q9NTX5 307 aa16.67■□□□□ 0.26
VARS-226ENST00000483275 PHF24Q9UPV7 400 aa16.67■□□□□ 0.26
VARS-226ENST00000483275 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
VARS-226ENST00000483275 A0A1W2PQ45 241 aaPredicted RBP16.66■□□□□ 0.26
VARS-226ENST00000483275 A0A1W2PQY0 241 aa16.66■□□□□ 0.26
VARS-226ENST00000483275 ZNF865P0CJ78 1059 aaPredicted RBP16.66■□□□□ 0.26
VARS-226ENST00000483275 ZNF697Q5TEC3 545 aa16.66■□□□□ 0.26
VARS-226ENST00000483275 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
VARS-226ENST00000483275 CPXCR1Q8N123 301 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms