RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 CD320Q9NPF0 282 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 UBP1Q9NZI7 540 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 GMIPQ9P107 970 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 ADAMTS1Q9UHI8 967 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 GGT7Q9UJ14 662 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 GPR160Q9UJ42 338 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 ROBO2Q9HCK4 1378 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 TCAF2A6NFQ2 919 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 PSPNO60542 156 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 EFEMP2O95967 443 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 MED14OSP0DP75 135 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 RPL10P27635 214 aaKnown RBP5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 DUSP4Q13115 394 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 MRPL58Q14197 206 aaKnown RBP5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 SEZ6Q53EL9 994 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 NBPF12Q5TAG4 269 aaPredicted RBP5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 GK5Q6ZS86 529 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZNF605Q86T29 641 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 SPPL2CQ8IUH8 684 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 LINC01599Q8WXQ3 324 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 TCTN2Q96GX1 697 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 INTS4Q96HW7 963 aaKnown RBP5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZNF512BQ96KM6 892 aaPredicted RBP5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 SLC26A8Q96RN1 970 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 FOXP3Q9BZS1 431 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 MCOLN1Q9GZU1 580 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 SLC6A17Q9H1V8 727 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 SMG5Q9UPR3 1016 aaKnown RBP5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 YBX2Q9Y2T7 364 aaKnown RBP5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZNF281Q9Y2X9 895 aa5.62□□□□□ -1.51
LAPTM4A-202ENST00000483117 GLDCP23378 1020 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 RNF4P78317 190 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 CHRNEQ04844 493 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 CLCQ05315 142 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 NBPF9Q3BBW0 867 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZNF326Q5BKZ1 582 aaKnown RBP5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 HS2ST1Q7LGA3 356 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 WAPLQ7Z5K2 1190 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 IRF2BP1Q8IU81 584 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 SIRT2Q8IXJ6 389 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 ANKS4BQ8N8V4 417 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 SYTL5Q8TDW5 730 aaPredicted RBP5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 SHISA4Q96DD7 197 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 ATG4CQ96DT6 458 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 ANTXR1Q9H6X2 564 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 CWC22Q9HCG8 908 aaKnown RBP5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 MINPP1Q9UNW1 487 aa5.61□□□□□ -1.51
LAPTM4A-202ENST00000483117 MYOCOSA0A1B0GUC4 107 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 NOTOA8MTQ0 251 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 USP2O75604 605 aaPredicted RBP5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 MCM4P33991 863 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 PDE6BP35913 854 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 CDCP2Q5VXM1 449 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZPBP2Q6X784 338 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 DAGLBQ8NCG7 672 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 ENOX1Q8TC92 643 aaKnown RBP5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 CNNM2Q9H8M5 875 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZMYM5Q9UJ78 669 aa5.6□□□□□ -1.51
LAPTM4A-202ENST00000483117 TMEM82A0PJX8 343 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 FKTNO75072 461 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 PRAMEF1O95521 474 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 APOBRQ0VD83 1088 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 RNF111Q6ZNA4 994 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 NLRC3Q7RTR2 1065 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 SIAH1Q8IUQ4 282 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 PRDM14Q9GZV8 571 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 TCFL5Q9UL49 500 aa5.59□□□□□ -1.51
LAPTM4A-202ENST00000483117 SSU72P8A0A1W2PR75 194 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 CLEC3AO75596 197 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 SYPP08247 313 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 NME1P15531 152 aaKnown RBP5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 PCBP3P57721 371 aaKnown RBP5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 LINC00310P59036 64 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 SNX17Q15036 470 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 BBS9Q3SYG4 887 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 CIAPIN1Q6FI81 312 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 TMEM192Q8IY95 271 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 REXO1Q8N1G1 1221 aaKnown RBP5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 ZNF655Q8N720 491 aaPredicted RBP5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 NKD1Q969G9 470 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 MAP6Q96JE9 813 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 SGPP1Q9BX95 441 aa5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 ZNF552Q9H707 407 aaPredicted RBP5.58□□□□□ -1.52
LAPTM4A-202ENST00000483117 MEIS1O00470 390 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 NUAK1O60285 661 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 PEX10O60683 326 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 ZNF165P49910 485 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 DLG4P78352 724 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 RAD51AP2Q09MP3 1159 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 SLC14A2Q15849 920 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 ADGRF1Q5T601 910 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 LDLRAD1Q5T700 205 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 TMEM132EQ6IEE7 984 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 CEP128Q6ZU80 1094 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 TMEM87AQ8NBN3 555 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 LINC00116Q8NCU8 138 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms