RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
SNX4-205ENST00000482965 TXNRD2Q9NNW7 524 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 TCP11L1Q9NUJ3 509 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 HOXC10Q9NYD6 342 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 RBPJLQ9UBG7 517 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 RABGAP1Q9Y3P9 1069 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 MYPNQ86TC9 1320 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 A0A0G2JMZ2 1700 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 TNPO2O14787 897 aaKnown RBP10.33□□□□□ -0.76
SNX4-205ENST00000482965 PEX10O60683 326 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 TOP1P11387 765 aaKnown RBP10.33□□□□□ -0.76
SNX4-205ENST00000482965 CTGFP29279 349 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 ERVK-9P63128 1117 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 ERVK-24P63145 666 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 LBX2Q6XYB7 198 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 RALYLQ86SE5 291 aaKnown RBP10.33□□□□□ -0.76
SNX4-205ENST00000482965 CCAR1Q8IX12 1150 aaKnown RBP10.33□□□□□ -0.76
SNX4-205ENST00000482965 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 ATG4CQ96DT6 458 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 ABHD8Q96I13 439 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 ZKSCAN3Q9BRR0 538 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 CWC22Q9HCG8 908 aaKnown RBP10.33□□□□□ -0.76
SNX4-205ENST00000482965 FBXO28Q9NVF7 368 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 MTMR7Q9Y216 660 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 PTPN22Q9Y2R2 807 aa10.33□□□□□ -0.76
SNX4-205ENST00000482965 CNMDO75829 334 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 BMP3P12645 472 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 SLC1A4P43007 532 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 NOVP48745 357 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 PRMT2P55345 433 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 CCNA1P78396 465 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 Q3C1V9 767 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 MB21D1Q8N884 522 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 COA7Q96BR5 231 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 TTC14Q96N46 770 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 SLF1Q9BQI6 1058 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 TMEM47Q9BQJ4 181 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 UBAC1Q9BSL1 405 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 BTBD7Q9P203 1132 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 ZSWIM5Q9P217 1185 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 SRRDQ9UH36 339 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 PPP1R9AQ9ULJ8 1098 aa10.32□□□□□ -0.76
SNX4-205ENST00000482965 E7EWF7 191 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 SLC27A2O14975 620 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 MCCP23508 829 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 MAPK4P31152 587 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 IKQ13123 557 aaPredicted RBP10.31□□□□□ -0.76
SNX4-205ENST00000482965 PLS1Q14651 629 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 CCDC96Q2M329 555 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 WDR78Q5VTH9 848 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 CREB3L3Q68CJ9 461 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 RCSD1Q6JBY9 416 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 DGKHQ86XP1 1220 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 NCOA7Q8NI08 942 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 RAET1EQ8TD07 263 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 GMCL1Q96IK5 515 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 ZSCAN10Q96SZ4 725 aaPredicted RBP10.31□□□□□ -0.76
SNX4-205ENST00000482965 PORCNQ9H237 461 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 FEM1BQ9UK73 627 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 CTDP1Q9Y5B0 961 aaPredicted RBP10.31□□□□□ -0.76
SNX4-205ENST00000482965 PTCH2Q9Y6C5 1203 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 TNKSO95271 1327 aa10.31□□□□□ -0.76
SNX4-205ENST00000482965 PLXNB2O15031 1838 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 TMEM232C9JQI7 657 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 REC8O95072 547 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 STAT2P52630 851 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 PRKCZQ05513 592 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 NECTIN1Q15223 517 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 KCTD1Q719H9 257 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 CYB5R4Q7L1T6 521 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 RASGRP2Q7LDG7 609 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 FAM160B2Q86V87 743 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 ENAHQ8N8S7 591 aaPredicted RBP10.3□□□□□ -0.76
SNX4-205ENST00000482965 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
SNX4-205ENST00000482965 CHURC1Q8WUH1 139 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 KIFC2Q96AC6 838 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 SPATC1LQ9H0A9 340 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 KAT14Q9H8E8 782 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 GABRQQ9UN88 632 aa10.3□□□□□ -0.76
SNX4-205ENST00000482965 ZNFX1Q9P2E3 1918 aaKnown RBP10.3□□□□□ -0.76
SNX4-205ENST00000482965 ERICH2A1L162 156 aa10.29□□□□□ -0.76
SNX4-205ENST00000482965 CCDC85CA6NKD9 419 aa10.29□□□□□ -0.76
SNX4-205ENST00000482965 VWA5AO00534 786 aa10.29□□□□□ -0.76
SNX4-205ENST00000482965 IFIT3O14879 490 aaKnown RBP10.29□□□□□ -0.76
SNX4-205ENST00000482965 ZBED4O75132 1171 aa10.29□□□□□ -0.76
SNX4-205ENST00000482965 FLT3LGP49771 235 aa10.29□□□□□ -0.76
SNX4-205ENST00000482965 TMEM132BQ14DG7 1078 aa10.29□□□□□ -0.76
SNX4-205ENST00000482965 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
SNX4-205ENST00000482965 SLC9C1Q4G0N8 1177 aa10.29□□□□□ -0.76
SNX4-205ENST00000482965 IFIT1BQ5T764 474 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms