RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 GPRASP2Q96D09 838 aa5.48□□□□□ -1.53
SNX27-205ENST00000482791 VWCEQ96DN2 955 aa5.48□□□□□ -1.53
SNX27-205ENST00000482791 ATG4CQ96DT6 458 aa5.48□□□□□ -1.53
SNX27-205ENST00000482791 Q96M66 194 aa5.48□□□□□ -1.53
SNX27-205ENST00000482791 KREMEN1Q96MU8 473 aa5.48□□□□□ -1.53
SNX27-205ENST00000482791 GPR62Q9BZJ7 368 aa5.48□□□□□ -1.53
SNX27-205ENST00000482791 TRIT1Q9H3H1 467 aaKnown RBP5.48□□□□□ -1.53
SNX27-205ENST00000482791 C19orf73Q9NVV2 129 aa5.48□□□□□ -1.53
SNX27-205ENST00000482791 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
SNX27-205ENST00000482791 CBX7O95931 251 aa5.47□□□□□ -1.53
SNX27-205ENST00000482791 SRFP11831 508 aa5.47□□□□□ -1.53
SNX27-205ENST00000482791 NME1P15531 152 aaKnown RBP5.47□□□□□ -1.53
SNX27-205ENST00000482791 GBP1P32455 592 aa5.47□□□□□ -1.53
SNX27-205ENST00000482791 TMPRSS7Q7RTY8 843 aa5.47□□□□□ -1.53
SNX27-205ENST00000482791 BAHD1Q8TBE0 780 aaPredicted RBP5.47□□□□□ -1.53
SNX27-205ENST00000482791 RELTQ969Z4 430 aa5.47□□□□□ -1.53
SNX27-205ENST00000482791 HSPA12BQ96MM6 686 aa5.47□□□□□ -1.53
SNX27-205ENST00000482791 RBAK-RBAKDNI3L0D1 243 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 FOXD2O60548 495 aaPredicted RBP5.46□□□□□ -1.54
SNX27-205ENST00000482791 UBOX5O94941 541 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 GLI1P08151 1106 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 TCF3P15923 654 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 CHMP4BP1P59074 171 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 IKZF1Q13422 519 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 KCNA10Q16322 511 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 DIRC2Q96SL1 478 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 KIF2CQ99661 725 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 TM9SF2Q99805 663 aa5.46□□□□□ -1.54
SNX27-205ENST00000482791 H3BS24 57 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 NFIBO00712 420 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 ZP2Q05996 745 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 GAB4Q2WGN9 574 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 CDKAL1Q5VV42 579 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 OR6P1Q8NGX9 317 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 ENOX1Q8TC92 643 aaKnown RBP5.45□□□□□ -1.54
SNX27-205ENST00000482791 CCDC120Q96HB5 630 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 SEC16BQ96JE7 1060 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 FERD3LQ96RJ6 166 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 DUSP15Q9H1R2 295 aaPredicted RBP5.45□□□□□ -1.54
SNX27-205ENST00000482791 CCSER2Q9H7U1 834 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 GPATCH2Q9NW75 528 aa5.45□□□□□ -1.54
SNX27-205ENST00000482791 NBPF12Q5TAG4 269 aaPredicted RBP5.44□□□□□ -1.54
SNX27-205ENST00000482791 MPZL3Q6UWV2 235 aa5.44□□□□□ -1.54
SNX27-205ENST00000482791 ATG14Q6ZNE5 492 aa5.44□□□□□ -1.54
SNX27-205ENST00000482791 TSPYL5Q86VY4 417 aaPredicted RBP5.44□□□□□ -1.54
SNX27-205ENST00000482791 NSUN3Q9H649 340 aaKnown RBP5.44□□□□□ -1.54
SNX27-205ENST00000482791 ATP13A1Q9HD20 1204 aa5.44□□□□□ -1.54
SNX27-205ENST00000482791 IGSF5Q9NSI5 407 aa5.44□□□□□ -1.54
SNX27-205ENST00000482791 PRR13Q9NZ81 148 aa5.44□□□□□ -1.54
SNX27-205ENST00000482791 STRIP2Q9ULQ0 834 aa5.44□□□□□ -1.54
SNX27-205ENST00000482791 CLEC3AO75596 197 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 NFKB2Q00653 900 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 KRTAP1-1Q07627 177 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 C19orf47Q8N9M1 422 aaKnown RBP5.43□□□□□ -1.54
SNX27-205ENST00000482791 SMARCC1Q92922 1105 aaPredicted RBP5.43□□□□□ -1.54
SNX27-205ENST00000482791 UBE2FQ969M7 185 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 DHRS1Q96LJ7 313 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 ANTXR1Q9H6X2 564 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 GINM1Q9NU53 330 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 SLC12A7Q9Y666 1083 aa5.43□□□□□ -1.54
SNX27-205ENST00000482791 ETV2O00321 342 aaPredicted RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 GUCY2CP25092 1073 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 ERCC5P28715 1186 aaPredicted RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 POLR2BP30876 1174 aaKnown RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 GIPRP48546 466 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 NBPF9Q3BBW0 867 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 C9orf131Q5VYM1 1079 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 FBXO15Q8NCQ5 510 aaPredicted RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 SYTL5Q8TDW5 730 aaPredicted RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 KIRREL1Q96J84 757 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 CRBNQ96SW2 442 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 SLC9A7Q96T83 725 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 ASCC2Q9H1I8 757 aaPredicted RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 CARS2Q9HA77 564 aaKnown RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 PARD6AQ9NPB6 346 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 ZSWIM5Q9P217 1185 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 SUCOQ9UBS9 1254 aaKnown RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 PPT2Q9UMR5 302 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 SMG5Q9UPR3 1016 aaKnown RBP5.42□□□□□ -1.54
SNX27-205ENST00000482791 EFR3BQ9Y2G0 817 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 INPP5FQ9Y2H2 1132 aa5.42□□□□□ -1.54
SNX27-205ENST00000482791 LRRN2O75325 713 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 ESR1P03372 595 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 MED14OSP0DP75 135 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 TPP2P29144 1249 aaPredicted RBP5.41□□□□□ -1.54
SNX27-205ENST00000482791 AFMP43652 599 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 EIF6P56537 245 aaKnown RBP5.41□□□□□ -1.54
SNX27-205ENST00000482791 LSRQ86X29 649 aaPredicted RBP5.41□□□□□ -1.54
SNX27-205ENST00000482791 TMEM192Q8IY95 271 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 SLC6A18Q96N87 628 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 ALPK1Q96QP1 1244 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 SRRTQ9BXP5 876 aaKnown RBP5.41□□□□□ -1.54
SNX27-205ENST00000482791 ACBD3Q9H3P7 528 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 DUSP13Q9UII6 198 aa5.41□□□□□ -1.54
SNX27-205ENST00000482791 ACRP10323 421 aa5.4□□□□□ -1.54
SNX27-205ENST00000482791 PMS1P54277 932 aaKnown RBP5.4□□□□□ -1.54
SNX27-205ENST00000482791 NMIQ13287 307 aaPredicted RBP5.4□□□□□ -1.54
SNX27-205ENST00000482791 GNL2Q13823 731 aaKnown RBP5.4□□□□□ -1.54
SNX27-205ENST00000482791 BBS9Q3SYG4 887 aa5.4□□□□□ -1.54
SNX27-205ENST00000482791 TMEM67Q5HYA8 995 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms