RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 MAPK4P31152 587 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 SLC1A4P43007 532 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 RNF20Q5VTR2 975 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 RALYLQ86SE5 291 aaKnown RBP19.52■□□□□ 0.72
HMGN1-214ENST00000482733 NCOA7Q8NI08 942 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 ZSCAN10Q96SZ4 725 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-214ENST00000482733 NUP88Q99567 741 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-214ENST00000482733 SLF1Q9BQI6 1058 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 TMEM47Q9BQJ4 181 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 UBAC1Q9BSL1 405 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 FEM1BQ9UK73 627 aa19.52■□□□□ 0.72
HMGN1-214ENST00000482733 E7EWF7 191 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 CNMDO75829 334 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 NECTIN1Q15223 517 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 Q3C1V9 767 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 RCSD1Q6JBY9 416 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 POTEEQ6S8J3 1075 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 PRPF38AQ8NAV1 312 aaKnown RBP19.51■□□□□ 0.71
HMGN1-214ENST00000482733 DCAF4Q8WV16 495 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 ANKS1AQ92625 1134 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 ATG4CQ96DT6 458 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 ABHD8Q96I13 439 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 ADAMTS5Q9UNA0 930 aa19.51■□□□□ 0.71
HMGN1-214ENST00000482733 SLC27A2O14975 620 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 PLA2G6O60733 806 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 ECM2O94769 699 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-214ENST00000482733 MCCP23508 829 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 CREB3L3Q68CJ9 461 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 NKX2-3Q8TAU0 364 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 CHURC1Q8WUH1 139 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 ZKSCAN3Q9BRR0 538 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 FBXO28Q9NVF7 368 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 BTBD7Q9P203 1132 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 HPS5Q9UPZ3 1129 aa19.5■□□□□ 0.71
HMGN1-214ENST00000482733 VWA5AO00534 786 aa19.49■□□□□ 0.71
HMGN1-214ENST00000482733 REC8O95072 547 aa19.49■□□□□ 0.71
HMGN1-214ENST00000482733 FDX1P10109 184 aa19.49■□□□□ 0.71
HMGN1-214ENST00000482733 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-214ENST00000482733 FAM160B2Q86V87 743 aa19.49■□□□□ 0.71
HMGN1-214ENST00000482733 SPATC1LQ9H0A9 340 aa19.49■□□□□ 0.71
HMGN1-214ENST00000482733 CWC22Q9HCG8 908 aaKnown RBP19.49■□□□□ 0.71
HMGN1-214ENST00000482733 ISY1Q9ULR0 285 aaKnown RBP19.49■□□□□ 0.71
HMGN1-214ENST00000482733 TNKSO95271 1327 aa19.49■□□□□ 0.71
HMGN1-214ENST00000482733 PEX10O60683 326 aa19.48■□□□□ 0.71
HMGN1-214ENST00000482733 STAT2P52630 851 aa19.48■□□□□ 0.71
HMGN1-214ENST00000482733 PRKCZQ05513 592 aa19.48■□□□□ 0.71
HMGN1-214ENST00000482733 SART3Q15020 963 aaKnown RBP19.48■□□□□ 0.71
HMGN1-214ENST00000482733 ENAHQ8N8S7 591 aaPredicted RBP19.48■□□□□ 0.71
HMGN1-214ENST00000482733 SHCBP1Q8NEM2 672 aa19.48■□□□□ 0.71
HMGN1-214ENST00000482733 RAET1EQ8TD07 263 aa19.48■□□□□ 0.71
HMGN1-214ENST00000482733 KAT14Q9H8E8 782 aa19.48■□□□□ 0.71
HMGN1-214ENST00000482733 PTCH2Q9Y6C5 1203 aa19.48■□□□□ 0.71
HMGN1-214ENST00000482733 ERICH2A1L162 156 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 TMEM232C9JQI7 657 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 EPB41L2O43491 1005 aaKnown RBP19.47■□□□□ 0.71
HMGN1-214ENST00000482733 ZBED4O75132 1171 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 COPB2P35606 906 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 IRF5Q13568 498 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 CCDC96Q2M329 555 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 STOX1Q6ZVD7 989 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 CYB5R4Q7L1T6 521 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 PLEKHH3Q7Z736 793 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 SOCS4Q8WXH5 440 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 KIFC2Q96AC6 838 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 PORCNQ9H237 461 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 CTDP1Q9Y5B0 961 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-214ENST00000482733 TAF6LQ9Y6J9 622 aa19.47■□□□□ 0.71
HMGN1-214ENST00000482733 SLC25A27O95847 323 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 ZKSCAN1P17029 563 aaPredicted RBP19.46■□□□□ 0.71
HMGN1-214ENST00000482733 FLT3LGP49771 235 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 IKQ13123 557 aaPredicted RBP19.46■□□□□ 0.71
HMGN1-214ENST00000482733 PLS1Q14651 629 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 TMEM132BQ14DG7 1078 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 IFIT1BQ5T764 474 aaKnown RBP19.46■□□□□ 0.71
HMGN1-214ENST00000482733 GPR142Q7Z601 462 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 NBPF11Q86T75 865 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 PNMA1Q8ND90 353 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 MTA3Q9BTC8 594 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 MOV10L1Q9BXT6 1211 aaKnown RBP19.46■□□□□ 0.71
HMGN1-214ENST00000482733 MROH8Q9H579 483 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 MTMR7Q9Y216 660 aa19.46■□□□□ 0.71
HMGN1-214ENST00000482733 MYH4Q9Y623 1939 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 IFIT3O14879 490 aaKnown RBP19.45■□□□□ 0.7
HMGN1-214ENST00000482733 SNHG28P0DPA3 235 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 PDHBP11177 359 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 STAT3P40763 770 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 KRT32Q14532 448 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 TSGA10IPQ3SY00 556 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 SLC9C1Q4G0N8 1177 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 KCTD1Q719H9 257 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 MB21D2Q8IYB1 491 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-214ENST00000482733 REPS2Q8NFH8 660 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 NUDT12Q9BQG2 462 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 SLC38A10Q9HBR0 1119 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 GABRQQ9UN88 632 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 IVNS1ABPQ9Y6Y0 642 aa19.45■□□□□ 0.7
HMGN1-214ENST00000482733 ATP2A1O14983 1001 aa19.44■□□□□ 0.7
HMGN1-214ENST00000482733 STRNO43815 780 aa19.44■□□□□ 0.7
HMGN1-214ENST00000482733 EIF5BO60841 1220 aaKnown RBP19.44■□□□□ 0.7
HMGN1-214ENST00000482733 MCM5P33992 734 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms