RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 UBAC1Q9BSL1 405 aa24.61■■□□□ 1.53
SEC13-217ENST00000482647 SLC27A2O14975 620 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 BMP3P12645 472 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 MCCP23508 829 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 SLC1A4P43007 532 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 CCNA1P78396 465 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 RNF20Q5VTR2 975 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 CREB3L3Q68CJ9 461 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 RCSD1Q6JBY9 416 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 FBXO46Q6PJ61 603 aaPredicted RBP24.6■■□□□ 1.53
SEC13-217ENST00000482647 SAMD1Q6SPF0 538 aaPredicted RBP24.6■■□□□ 1.53
SEC13-217ENST00000482647 CCAR1Q8IX12 1150 aaKnown RBP24.6■■□□□ 1.53
SEC13-217ENST00000482647 PTPN22Q9Y2R2 807 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 TAF6LQ9Y6J9 622 aa24.6■■□□□ 1.53
SEC13-217ENST00000482647 TNPO2O14787 897 aaKnown RBP24.59■■□□□ 1.53
SEC13-217ENST00000482647 PEX10O60683 326 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 PRMT2P55345 433 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 Q3C1V9 767 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 ANKS1AQ92625 1134 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 SLF1Q9BQI6 1058 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 FBXO28Q9NVF7 368 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 FEM1BQ9UK73 627 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 PPP1R9AQ9ULJ8 1098 aa24.59■■□□□ 1.53
SEC13-217ENST00000482647 ISY1Q9ULR0 285 aaKnown RBP24.59■■□□□ 1.53
SEC13-217ENST00000482647 LAMA4Q16363 1823 aa24.58■■□□□ 1.53
SEC13-217ENST00000482647 CNMDO75829 334 aa24.58■■□□□ 1.53
SEC13-217ENST00000482647 REC8O95072 547 aa24.58■■□□□ 1.53
SEC13-217ENST00000482647 PRPF38AQ8NAV1 312 aaKnown RBP24.58■■□□□ 1.53
SEC13-217ENST00000482647 COA7Q96BR5 231 aa24.58■■□□□ 1.53
SEC13-217ENST00000482647 ATG4CQ96DT6 458 aa24.58■■□□□ 1.53
SEC13-217ENST00000482647 BTBD7Q9P203 1132 aa24.58■■□□□ 1.53
SEC13-217ENST00000482647 ADAMTS5Q9UNA0 930 aa24.58■■□□□ 1.53
SEC13-217ENST00000482647 MAPK4P31152 587 aa24.57■■□□□ 1.52
SEC13-217ENST00000482647 STOX1Q6ZVD7 989 aa24.57■■□□□ 1.52
SEC13-217ENST00000482647 ENAHQ8N8S7 591 aaPredicted RBP24.57■■□□□ 1.52
SEC13-217ENST00000482647 DCAF4Q8WV16 495 aa24.57■■□□□ 1.52
SEC13-217ENST00000482647 SRRDQ9UH36 339 aa24.57■■□□□ 1.52
SEC13-217ENST00000482647 TNKSO95271 1327 aa24.57■■□□□ 1.52
SEC13-217ENST00000482647 VWA5AO00534 786 aa24.56■■□□□ 1.52
SEC13-217ENST00000482647 CYB5R4Q7L1T6 521 aa24.56■■□□□ 1.52
SEC13-217ENST00000482647 CHURC1Q8WUH1 139 aa24.56■■□□□ 1.52
SEC13-217ENST00000482647 CHMP4CQ96CF2 233 aa24.56■■□□□ 1.52
SEC13-217ENST00000482647 KAT14Q9H8E8 782 aa24.56■■□□□ 1.52
SEC13-217ENST00000482647 MTMR7Q9Y216 660 aa24.56■■□□□ 1.52
SEC13-217ENST00000482647 TMEM232C9JQI7 657 aa24.55■■□□□ 1.52
SEC13-217ENST00000482647 SART3Q15020 963 aaKnown RBP24.55■■□□□ 1.52
SEC13-217ENST00000482647 ERICH2A1L162 156 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 PLA2G6O60733 806 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 ZKSCAN1P17029 563 aaPredicted RBP24.54■■□□□ 1.52
SEC13-217ENST00000482647 STAT2P52630 851 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 IKQ13123 557 aaPredicted RBP24.54■■□□□ 1.52
SEC13-217ENST00000482647 IFIT1BQ5T764 474 aaKnown RBP24.54■■□□□ 1.52
SEC13-217ENST00000482647 FAM160B2Q86V87 743 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 KIFC2Q96AC6 838 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 ABHD8Q96I13 439 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 SPATC1LQ9H0A9 340 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 PORCNQ9H237 461 aa24.54■■□□□ 1.52
SEC13-217ENST00000482647 CWC22Q9HCG8 908 aaKnown RBP24.54■■□□□ 1.52
SEC13-217ENST00000482647 IFIT3O14879 490 aaKnown RBP24.53■■□□□ 1.52
SEC13-217ENST00000482647 ZBED4O75132 1171 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 PRKCZQ05513 592 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 PLS1Q14651 629 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 TMEM132BQ14DG7 1078 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 CCDC96Q2M329 555 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 KCTD1Q719H9 257 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 MB21D2Q8IYB1 491 aaPredicted RBP24.53■■□□□ 1.52
SEC13-217ENST00000482647 PNMA1Q8ND90 353 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 RAET1EQ8TD07 263 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 HPS5Q9UPZ3 1129 aa24.53■■□□□ 1.52
SEC13-217ENST00000482647 CTDP1Q9Y5B0 961 aaPredicted RBP24.53■■□□□ 1.52
SEC13-217ENST00000482647 FDX1P10109 184 aa24.52■■□□□ 1.52
SEC13-217ENST00000482647 PDHBP11177 359 aa24.52■■□□□ 1.52
SEC13-217ENST00000482647 SEC23AQ15436 765 aa24.52■■□□□ 1.52
SEC13-217ENST00000482647 TSGA10IPQ3SY00 556 aa24.52■■□□□ 1.52
SEC13-217ENST00000482647 PLEKHH3Q7Z736 793 aa24.52■■□□□ 1.52
SEC13-217ENST00000482647 MOV10L1Q9BXT6 1211 aaKnown RBP24.52■■□□□ 1.52
SEC13-217ENST00000482647 PTCH2Q9Y6C5 1203 aa24.52■■□□□ 1.52
SEC13-217ENST00000482647 MYH4Q9Y623 1939 aa24.52■■□□□ 1.52
SEC13-217ENST00000482647 HTTP42858 3142 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 EPB41L2O43491 1005 aaKnown RBP24.51■■□□□ 1.51
SEC13-217ENST00000482647 MCM5P33992 734 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 FLT3LGP49771 235 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 KRT32Q14532 448 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 WDR78Q5VTH9 848 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 CHST3Q7LGC8 479 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 GPR142Q7Z601 462 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 SHCBP1Q8NEM2 672 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 GABRQQ9UN88 632 aa24.51■■□□□ 1.51
SEC13-217ENST00000482647 SLC25A27O95847 323 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 SNHG28P0DPA3 235 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 STAT3P40763 770 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 RASGRP2Q7LDG7 609 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 REPS2Q8NFH8 660 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 MTA3Q9BTC8 594 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 MROH8Q9H579 483 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 SLC38A10Q9HBR0 1119 aa24.5■■□□□ 1.51
SEC13-217ENST00000482647 PRC1O43663 620 aa24.49■■□□□ 1.51
SEC13-217ENST00000482647 HSPA4P34932 840 aa24.49■■□□□ 1.51
SEC13-217ENST00000482647 WTAPQ15007 396 aa24.49■■□□□ 1.51
SEC13-217ENST00000482647 TMEM67Q5HYA8 995 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms