RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PABPC4Q13310 644 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRAPPC12-220ENST00000482645 KCTD1Q719H9 257 aa23.29■■□□□ 1.32
TRAPPC12-220ENST00000482645 TMTC2Q8N394 836 aa23.29■■□□□ 1.32
TRAPPC12-220ENST00000482645 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
TRAPPC12-220ENST00000482645 MYL10Q9BUA6 226 aa23.29■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L15C9J2P7 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L13C9JLJ4 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L11C9JVI0 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L18D6R9N7 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L22D6RA61 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L17D6RBQ6 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L19D6RCP7 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L20D6RJB6 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 PDHBP11177 359 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 BMP3P12645 472 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 USP17L24Q0WX57 530 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 IKQ13123 557 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 GMCL1Q96IK5 515 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 SLC12A7Q9Y666 1083 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 CYP2C8P10632 490 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 RXRAP19793 462 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 APOBRQ0VD83 1088 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 TAF1CQ15572 869 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 NOL8Q76FK4 1167 aaKnown RBP23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 ZNF654Q8IZM8 581 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 DCAF4Q8WV16 495 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 LARP6Q9BRS8 491 aaKnown RBP23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 GPCPD1Q9NPB8 672 aa23.28■■□□□ 1.32
TRAPPC12-220ENST00000482645 KLF18A0A0U1RQI7 1052 aa23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 FLOT1O75955 427 aa23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 CD2BP2O95400 341 aaKnown RBP23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 GOLGA8HP0CJ92 632 aa23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 OSBPP22059 807 aa23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 MICU3Q86XE3 530 aa23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 CCDC144CPQ8IYA2 1237 aa23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 ASCC2Q9H1I8 757 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 PNMA3Q9UL41 463 aa23.27■■□□□ 1.32
TRAPPC12-220ENST00000482645 HOXA7P31268 230 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 MAP2K1Q02750 393 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 TOB2Q14106 344 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 SYNE3Q6ZMZ3 975 aa23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 CATSPERGQ6ZRH7 1159 aa23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 SGMS1Q86VZ5 419 aa23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 SMCR8Q8TEV9 937 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 BEGAINQ9BUH8 593 aa23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 FBXO28Q9NVF7 368 aa23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
TRAPPC12-220ENST00000482645 TMEM232C9JQI7 657 aa23.25■■□□□ 1.31
TRAPPC12-220ENST00000482645 TRPA1O75762 1119 aa23.25■■□□□ 1.31
TRAPPC12-220ENST00000482645 AK2P54819 239 aa23.25■■□□□ 1.31
TRAPPC12-220ENST00000482645 SLC45A1Q9Y2W3 748 aa23.25■■□□□ 1.31
TRAPPC12-220ENST00000482645 ALDH1A1P00352 501 aa23.24■■□□□ 1.31
TRAPPC12-220ENST00000482645 PARP1P09874 1014 aaKnown RBP23.24■■□□□ 1.31
TRAPPC12-220ENST00000482645 TROAPQ12815 778 aa23.24■■□□□ 1.31
TRAPPC12-220ENST00000482645 APOA5Q6Q788 366 aa23.24■■□□□ 1.31
TRAPPC12-220ENST00000482645 KIFC2Q96AC6 838 aa23.24■■□□□ 1.31
TRAPPC12-220ENST00000482645 P2RX7Q99572 595 aaKnown RBP23.24■■□□□ 1.31
TRAPPC12-220ENST00000482645 RNF186Q9NXI6 227 aa23.24■■□□□ 1.31
TRAPPC12-220ENST00000482645 GOLGA8BA8MQT2 603 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 DDAH1O94760 285 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 SNHG28P0DPA3 235 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 STAT2P52630 851 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 ZNF543Q08ER8 600 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 CRHR2Q13324 411 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 TTBK2Q6IQ55 1244 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 HSCBQ8IWL3 235 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 ZCCHC17Q9NP64 241 aaKnown RBP23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 FEM1BQ9UK73 627 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 ZBTB43O43298 467 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 TBC1D8O95759 1140 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 SLC16A2P36021 539 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 COG2Q14746 738 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 FBXL16Q8N461 479 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 AGXT2Q9BYV1 514 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 ZFYVE28Q9HCC9 887 aa23.23■■□□□ 1.31
TRAPPC12-220ENST00000482645 HERVK_113P62684 666 aa23.22■■□□□ 1.31
TRAPPC12-220ENST00000482645 GRM4Q14833 912 aa23.22■■□□□ 1.31
TRAPPC12-220ENST00000482645 ASPRV1Q53RT3 343 aa23.22■■□□□ 1.31
TRAPPC12-220ENST00000482645 GPATCH4Q5T3I0 446 aaKnown RBP23.22■■□□□ 1.31
TRAPPC12-220ENST00000482645 STAG2Q8N3U4 1231 aa23.22■■□□□ 1.31
TRAPPC12-220ENST00000482645 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
TRAPPC12-220ENST00000482645 CPVLQ9H3G5 476 aa23.22■■□□□ 1.31
TRAPPC12-220ENST00000482645 CA12O43570 354 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 CALM1P0DP23 149 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 CALM2P0DP24 149 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 CALM3P0DP25 149 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 ANKRD1Q15327 319 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 CHURC1Q8WUH1 139 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 ATG4CQ96DT6 458 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 UBA5Q9GZZ9 404 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 MAD2L2Q9UI95 211 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 TSKSQ9UJT2 592 aa23.21■■□□□ 1.31
TRAPPC12-220ENST00000482645 SPDYE16A6NNV3 312 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 GOLGA8AA7E2F4 631 aa23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 DHX16O60231 1041 aaKnown RBP23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 DSG3P32926 999 aa23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 IL27Q8NEV9 243 aa23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 SNX21Q969T3 373 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms