RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 USP17L18D6R9N7 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L22D6RA61 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L17D6RBQ6 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L19D6RCP7 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L20D6RJB6 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 VCAM1P19320 739 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L24Q0WX57 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 ARHGEF6Q15052 776 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 IMMTQ16891 758 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 KIAA1211Q6ZU35 1233 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 CWC22Q9HCG8 908 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 CLIP2Q9UDT6 1046 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 CTNNA3Q9UI47 895 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 ZMYM6O95789 1325 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 COL11A1P12107 1806 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 BMP2KLQ5H9B9 411 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 AKNAD1Q5T1N1 836 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 C17orf99Q6UX52 265 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 CCAR1Q8IX12 1150 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 LRRC47Q8N1G4 583 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 SLAIN1Q8ND83 568 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 CEP95Q96GE4 821 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 ARHGAP39Q9C0H5 1083 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 RNF41Q9H4P4 317 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 VCPKMTQ9H867 229 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 ANAPC4Q9UJX5 808 aa11.82□□□□□ -0.52
SPTLC1-206ENST00000482632 DOCK3Q8IZD9 2030 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 SGSM2O43147 1006 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 NMT2O60551 498 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 CDC45O75419 566 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 PSMC4P43686 418 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 HERVK_113P62684 666 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 LACTBP83111 547 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 PTH1RQ03431 593 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 WDR78Q5VTH9 848 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 OTOP1Q7RTM1 612 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 C12orf42Q96LP6 360 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 STX8Q9UNK0 236 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.81□□□□□ -0.525e-6■□□□□ 9.7
SPTLC1-206ENST00000482632 TMX2Q9Y320 296 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 TACC3Q9Y6A5 838 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 NEDD4P46934 1319 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 ADGRA2Q96PE1 1338 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
SPTLC1-206ENST00000482632 ORC4O43929 436 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 PEX10O60683 326 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 FLOT1O75955 427 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 TTLL1O95922 423 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 FCGRTP55899 365 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 IKQ13123 557 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 KIAA1755Q5JYT7 1200 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 FAM83BQ5T0W9 1011 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 CATSPERGQ6ZRH7 1159 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 SIAH1Q8IUQ4 282 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 NEDD1Q8NHV4 660 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 LPAR1Q92633 364 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 MTMR4Q9NYA4 1195 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 NYAP2Q9P242 653 aa11.8□□□□□ -0.52
SPTLC1-206ENST00000482632 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 B4E1Z4 1266 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 WDR46O15213 610 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 BCRP11274 1271 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 PLS1Q14651 629 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 ESR2Q92731 530 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 NUP88Q99567 741 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 ZKSCAN3Q9BRR0 538 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 NBPF3Q9H094 633 aa11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 CTDP1Q9Y5B0 961 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-206ENST00000482632 IGKV6D-41A0A0C4DH26 115 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 KDM4AO75164 1064 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 NDUFB10O96000 172 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 HOXD10P28358 340 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 CAP1Q01518 475 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 TRDNQ13061 729 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 PKN2Q16513 984 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 FAM110CQ1W6H9 321 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 FBXO46Q6PJ61 603 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 GTF3C2Q8WUA4 911 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-206ENST00000482632 PLXNB2O15031 1838 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms