RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 DNAJC25Q9H1X3 360 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 ATXN3LQ9H3M9 355 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 PIDD1Q9HB75 910 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
CLK1-212ENST00000482590 SMARCA5O60264 1052 aaPredicted RBP9.02□□□□□ -0.97
CLK1-212ENST00000482590 GADD45BO75293 160 aaPredicted RBP9.02□□□□□ -0.97
CLK1-212ENST00000482590 SLFN14P0C7P3 912 aa9.02□□□□□ -0.97
CLK1-212ENST00000482590 GRM2Q14416 872 aa9.02□□□□□ -0.97
CLK1-212ENST00000482590 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
CLK1-212ENST00000482590 B4GALNT3Q6L9W6 998 aa9.02□□□□□ -0.97
CLK1-212ENST00000482590 SMYD4Q8IYR2 804 aaPredicted RBP9.02□□□□□ -0.97
CLK1-212ENST00000482590 CITED4Q96RK1 184 aa9.02□□□□□ -0.97
CLK1-212ENST00000482590 NIF3L1Q9GZT8 377 aa9.02□□□□□ -0.97
CLK1-212ENST00000482590 GNEQ9Y223 722 aaKnown RBP9.02□□□□□ -0.97
CLK1-212ENST00000482590 BLMP54132 1417 aaPredicted RBP9.02□□□□□ -0.97
CLK1-212ENST00000482590 TNS1Q9HBL0 1735 aaKnown RBP9.02□□□□□ -0.97
CLK1-212ENST00000482590 QRICH2Q9H0J4 1663 aa9.01□□□□□ -0.97
CLK1-212ENST00000482590 GSTP1P09211 210 aaKnown RBP9.01□□□□□ -0.97
CLK1-212ENST00000482590 CD8BP10966 210 aa9.01□□□□□ -0.97
CLK1-212ENST00000482590 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
CLK1-212ENST00000482590 ATP7BP35670 1465 aa9.01□□□□□ -0.97
CLK1-212ENST00000482590 THSD7AQ9UPZ6 1657 aa9□□□□□ -0.97
CLK1-212ENST00000482590 GPRASP1Q5JY77 1395 aa9□□□□□ -0.97
CLK1-212ENST00000482590 ERCC3P19447 782 aa9□□□□□ -0.97
CLK1-212ENST00000482590 FUT4P22083 530 aa9□□□□□ -0.97
CLK1-212ENST00000482590 TTLL4Q14679 1199 aa9□□□□□ -0.97
CLK1-212ENST00000482590 ANKRD13AQ8IZ07 590 aa9□□□□□ -0.97
CLK1-212ENST00000482590 PMFBP1Q8TBY8 1022 aa9□□□□□ -0.97
CLK1-212ENST00000482590 EPS8L3Q8TE67 593 aaKnown RBP9□□□□□ -0.97
CLK1-212ENST00000482590 SREK1Q8WXA9 508 aaKnown RBP9□□□□□ -0.97
CLK1-212ENST00000482590 KRT82Q9NSB4 513 aa9□□□□□ -0.97
CLK1-212ENST00000482590 TRAK1Q9UPV9 953 aa9□□□□□ -0.97
CLK1-212ENST00000482590 LRP5O75197 1615 aa9□□□□□ -0.97
CLK1-212ENST00000482590 BIN1O00499 593 aa8.99□□□□□ -0.97
CLK1-212ENST00000482590 LEFTY1O75610 366 aa8.99□□□□□ -0.97
CLK1-212ENST00000482590 CD96P40200 585 aa8.99□□□□□ -0.97
CLK1-212ENST00000482590 ZNF648Q5T619 568 aaPredicted RBP8.99□□□□□ -0.97
CLK1-212ENST00000482590 HIRIP3Q9BW71 556 aaPredicted RBP8.99□□□□□ -0.97
CLK1-212ENST00000482590 MBNL3Q9NUK0 354 aaKnown RBP8.99□□□□□ -0.97
CLK1-212ENST00000482590 ADAMTS6Q9UKP5 1117 aa8.99□□□□□ -0.97
CLK1-212ENST00000482590 VAV3Q9UKW4 847 aa8.99□□□□□ -0.97
CLK1-212ENST00000482590 NRKQ7Z2Y5 1582 aa8.99□□□□□ -0.97
CLK1-212ENST00000482590 WNK3Q9BYP7 1800 aa8.98□□□□□ -0.97
CLK1-212ENST00000482590 RNASE1P07998 156 aaKnown RBP8.98□□□□□ -0.97
CLK1-212ENST00000482590 HCLS1P14317 486 aaPredicted RBP8.98□□□□□ -0.97
CLK1-212ENST00000482590 VPS72Q15906 364 aa8.98□□□□□ -0.97
CLK1-212ENST00000482590 ATG4DQ86TL0 474 aaPredicted RBP8.98□□□□□ -0.97
CLK1-212ENST00000482590 PDZD3Q86UT5 571 aa8.98□□□□□ -0.97
CLK1-212ENST00000482590 SRCAPQ6ZRS2 3230 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 RNGTTO60942 597 aaKnown RBP8.97□□□□□ -0.97
CLK1-212ENST00000482590 NEFMP07197 916 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 TCF3P15923 654 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 PRKCQQ04759 706 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 CERS3Q8IU89 383 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 TMC1Q8TDI8 760 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 CSRNP1Q96S65 589 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 DUSP23Q9BVJ7 150 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 RC3H2Q9HBD1 1191 aaKnown RBP8.97□□□□□ -0.97
CLK1-212ENST00000482590 PRR36Q9H6K5 1346 aa8.97□□□□□ -0.97
CLK1-212ENST00000482590 OXCT1P55809 520 aa8.96□□□□□ -0.98
CLK1-212ENST00000482590 DTHD1Q6ZMT9 781 aa8.96□□□□□ -0.98
CLK1-212ENST00000482590 NGDNQ8NEJ9 315 aaKnown RBP8.96□□□□□ -0.98
CLK1-212ENST00000482590 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
CLK1-212ENST00000482590 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
CLK1-212ENST00000482590 PCOLCE2Q9UKZ9 415 aa8.96□□□□□ -0.98
CLK1-212ENST00000482590 PLAGL2Q9UPG8 496 aa8.96□□□□□ -0.98
CLK1-212ENST00000482590 AKAP12Q02952 1782 aa8.96□□□□□ -0.98
CLK1-212ENST00000482590 RREB1Q92766 1687 aa8.95□□□□□ -0.98
CLK1-212ENST00000482590 FCGRTP55899 365 aa8.95□□□□□ -0.98
CLK1-212ENST00000482590 PPP2R3AQ06190 1150 aa8.95□□□□□ -0.98
CLK1-212ENST00000482590 IFI16Q16666 785 aaKnown RBP8.95□□□□□ -0.98
CLK1-212ENST00000482590 KRT27Q7Z3Y8 459 aa8.95□□□□□ -0.98
CLK1-212ENST00000482590 STK35Q8TDR2 534 aa8.95□□□□□ -0.98
CLK1-212ENST00000482590 KCNB2Q92953 911 aa8.95□□□□□ -0.98
CLK1-212ENST00000482590 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
CLK1-212ENST00000482590 GPN3Q9UHW5 284 aaPredicted RBP8.95□□□□□ -0.98
CLK1-212ENST00000482590 TRPM1Q7Z4N2 1603 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 LMO7Q8WWI1 1683 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 PARP4Q9UKK3 1724 aaKnown RBP8.94□□□□□ -0.98
CLK1-212ENST00000482590 CEACAM5P06731 702 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 AOC3Q16853 763 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 PI16Q6UXB8 463 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 LRRN4CLQ8ND94 238 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 PI4K2BQ8TCG2 481 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 FAM168AQ92567 244 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 ISL2Q96A47 359 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 ALKBH8Q96BT7 664 aaKnown RBP8.94□□□□□ -0.98
CLK1-212ENST00000482590 NUP188Q5SRE5 1749 aa8.94□□□□□ -0.98
CLK1-212ENST00000482590 HNRNPUQ00839 825 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLK1-212ENST00000482590 ZNF124Q15973 351 aa8.93□□□□□ -0.98
CLK1-212ENST00000482590 ZC3H12AQ5D1E8 599 aaKnown RBP8.93□□□□□ -0.98
CLK1-212ENST00000482590 DNAJC14Q6Y2X3 702 aaPredicted RBP8.93□□□□□ -0.98
CLK1-212ENST00000482590 DEFB132Q7Z7B7 95 aa8.93□□□□□ -0.98
CLK1-212ENST00000482590 HRASLS5Q96KN8 279 aa8.93□□□□□ -0.98
CLK1-212ENST00000482590 DMRTB1Q96MA1 342 aa8.93□□□□□ -0.98
CLK1-212ENST00000482590 PRDM11Q9NQV5 511 aa8.93□□□□□ -0.98
CLK1-212ENST00000482590 RGPD5Q99666 1765 aa8.93□□□□□ -0.98
CLK1-212ENST00000482590 SBF2Q86WG5 1849 aa8.92□□□□□ -0.98
CLK1-212ENST00000482590 FAM83GA6ND36 823 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms