RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PRPF3O43395 683 aaKnown RBP16.92■□□□□ 0.3
ATG4B-220ENST00000482507 ERCC5P28715 1186 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-220ENST00000482507 KRT2P35908 639 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 TROAPQ12815 778 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 KLHL10Q6JEL2 608 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 KANK3Q6NY19 840 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 ATRIPQ8WXE1 791 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 MRPL44Q9H9J2 332 aaKnown RBP16.92■□□□□ 0.3
ATG4B-220ENST00000482507 ANKIB1Q9P2G1 1089 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 PDE6BP35913 854 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 GNG11P61952 73 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 DPYDQ12882 1025 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 ZNF174Q15697 407 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 C2CD5Q86YS7 1000 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 UBXN4Q92575 508 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
ATG4B-220ENST00000482507 COBLO75128 1261 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 ZRANB2O95218 330 aaKnown RBP eCLIP16.91■□□□□ 0.3
ATG4B-220ENST00000482507 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-220ENST00000482507 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
ATG4B-220ENST00000482507 MNS1Q8NEH6 495 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 STAMQ92783 540 aa16.91■□□□□ 0.3
ATG4B-220ENST00000482507 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-220ENST00000482507 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-220ENST00000482507 SOWAHDA6NJG2 315 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 NMT2O60551 498 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 PNMA6AP0CW24 399 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-220ENST00000482507 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-220ENST00000482507 MAP3K9P80192 1104 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 KARSQ15046 597 aaKnown RBP16.9■□□□□ 0.3
ATG4B-220ENST00000482507 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
ATG4B-220ENST00000482507 ZNF771Q7L3S4 317 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-220ENST00000482507 PPP1R3GB7ZBB8 358 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 PBX1P40424 430 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 TXNRD3Q86VQ6 643 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 SRRTQ9BXP5 876 aaKnown RBP16.9■□□□□ 0.3
ATG4B-220ENST00000482507 LAMB2P55268 1798 aa16.9■□□□□ 0.3
ATG4B-220ENST00000482507 EFCAB8A8MWE9 144 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 CASQ1P31415 396 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 PLA2G4AP47712 749 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 RBL2Q08999 1139 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 RAD9BQ6WBX8 426 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 TMTC3Q6ZXV5 915 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 CATIPQ7Z7H3 387 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 ADD3Q9UEY8 706 aaKnown RBP16.89■□□□□ 0.29
ATG4B-220ENST00000482507 SYNRGQ9UMZ2 1314 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 MRFAP1Q9Y605 127 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 SEC31AO94979 1220 aaKnown RBP16.89■□□□□ 0.29
ATG4B-220ENST00000482507 FGRP09769 529 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 GPSM2P81274 684 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.29
ATG4B-220ENST00000482507 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
ATG4B-220ENST00000482507 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
ATG4B-220ENST00000482507 XDHP47989 1333 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 CNTNAP5Q8WYK1 1306 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 H0YIN7 160 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 NPR1P16066 1061 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 IL17AQ16552 155 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 FAM84BQ96KN1 310 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-220ENST00000482507 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
ATG4B-220ENST00000482507 USP17L12C9JPN9 530 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-220ENST00000482507 USP17L21D6R901 530 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 XBP1P17861 261 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 PTGDRQ13258 359 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 TTC38Q5R3I4 469 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 MTRQ99707 1265 aa16.88■□□□□ 0.29
ATG4B-220ENST00000482507 A0A1B0GUL6 1792 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 BBOX1O75936 387 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 PANX2Q96RD6 677 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATG4B-220ENST00000482507 GOLGA6L9A6NEM1 432 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-220ENST00000482507 ATP2C1P98194 919 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-220ENST00000482507 E2F4Q16254 413 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 MTFR1LQ9H019 292 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 BLZF1Q9H2G9 400 aa16.87■□□□□ 0.29
ATG4B-220ENST00000482507 CYP2D6P10635 497 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 PPP2R3AQ06190 1150 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 UBE4AQ14139 1066 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 RSRC2Q7L4I2 434 aaKnown RBP16.86■□□□□ 0.29
ATG4B-220ENST00000482507 GSDMAQ96QA5 445 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 RBM28Q9NW13 759 aaKnown RBP16.86■□□□□ 0.29
ATG4B-220ENST00000482507 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 ADGRG1Q9Y653 693 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 BAZ2BQ9UIF8 2168 aaKnown RBP16.86■□□□□ 0.29
ATG4B-220ENST00000482507 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 LZTFL1Q9NQ48 299 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 GNL3LQ9NVN8 582 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms