RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 TSPY2A6NKD2 308 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 F5H6K3 240 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 IGHDP01880 384 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 TFAP4Q01664 338 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 KLRC3Q07444 240 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 ANKLE1Q8NAG6 615 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 CEP95Q96GE4 821 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 TOMM22Q9NS69 142 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 SYNPO2Q9UMS6 1093 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 NR2E3Q9Y5X4 410 aa23.62■■□□□ 1.37
MSH5-215ENST00000482280 FCER1AP12319 257 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 COPB2P35606 906 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 CACNB2Q08289 660 aaPredicted RBP23.61■■□□□ 1.37
MSH5-215ENST00000482280 CCL14Q16627 93 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 NECAB2Q7Z6G3 386 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 SLF1Q9BQI6 1058 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 CRISPLD2Q9H0B8 497 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 MTMR4Q9NYA4 1195 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 PPP1R9AQ9ULJ8 1098 aa23.61■■□□□ 1.37
MSH5-215ENST00000482280 ADORA2AP29274 412 aa23.6■■□□□ 1.37
MSH5-215ENST00000482280 FAM47AQ5JRC9 791 aa23.6■■□□□ 1.37
MSH5-215ENST00000482280 MAP3K21Q5TCX8 1036 aa23.6■■□□□ 1.37
MSH5-215ENST00000482280 NEDD1Q8NHV4 660 aa23.6■■□□□ 1.37
MSH5-215ENST00000482280 FBXO28Q9NVF7 368 aa23.6■■□□□ 1.37
MSH5-215ENST00000482280 DOCK3Q8IZD9 2030 aa23.6■■□□□ 1.37
MSH5-215ENST00000482280 NDUFB10O96000 172 aa23.59■■□□□ 1.37
MSH5-215ENST00000482280 HOXC6P09630 235 aa23.59■■□□□ 1.37
MSH5-215ENST00000482280 CNGA1P29973 690 aa23.59■■□□□ 1.37
MSH5-215ENST00000482280 ABRAQ8N0Z2 381 aa23.59■■□□□ 1.37
MSH5-215ENST00000482280 PRPF38AQ8NAV1 312 aaKnown RBP23.59■■□□□ 1.37
MSH5-215ENST00000482280 FAM227BQ96M60 508 aa23.59■■□□□ 1.37
MSH5-215ENST00000482280 NUP88Q99567 741 aaPredicted RBP23.59■■□□□ 1.37
MSH5-215ENST00000482280 DIAPH3Q9NSV4 1193 aa23.59■■□□□ 1.37
MSH5-215ENST00000482280 HIP1O00291 1037 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 VWA5AO00534 786 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 RANBP6O60518 1105 aaKnown RBP23.58■■□□□ 1.37
MSH5-215ENST00000482280 ZBED4O75132 1171 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 STAT3P40763 770 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 CTDSPL2Q05D32 466 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 NMIQ13287 307 aaPredicted RBP23.58■■□□□ 1.37
MSH5-215ENST00000482280 KCTD2Q14681 263 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 TMEM132BQ14DG7 1078 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 PLEKHM2Q8IWE5 1019 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 LRRC47Q8N1G4 583 aaKnown RBP23.58■■□□□ 1.37
MSH5-215ENST00000482280 PAWRQ96IZ0 340 aaKnown RBP23.58■■□□□ 1.37
MSH5-215ENST00000482280 NBPF3Q9H094 633 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 OSBPL3Q9H4L5 887 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 STX8Q9UNK0 236 aa23.58■■□□□ 1.37
MSH5-215ENST00000482280 PLXNB2O15031 1838 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 PLIN4Q96Q06 1357 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 IGKV6D-41A0A0C4DH26 115 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 A0A0D9SFI3 127 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 EVI5O60447 810 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 IKQ13123 557 aaPredicted RBP23.57■■□□□ 1.36
MSH5-215ENST00000482280 ALX1Q15699 326 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 VPS53Q5VIR6 699 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 UBE2Q1Q7Z7E8 422 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 GMCL1P1Q8NEA9 526 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 MKL1Q969V6 931 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 MMP19Q99542 508 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 CCDC171Q6TFL3 1326 aa23.57■■□□□ 1.36
MSH5-215ENST00000482280 MSCO60682 206 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 SLFN13Q68D06 897 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 RIOX2Q8IUF8 465 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 NPLOC4Q8TAT6 608 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 KIFC2Q96AC6 838 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 TEX13BQ9BXU2 312 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 ANAPC4Q9UJX5 808 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 FEM1BQ9UK73 627 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 ADAMTS5Q9UNA0 930 aa23.56■■□□□ 1.36
MSH5-215ENST00000482280 H0YGN5 161 aa23.55■■□□□ 1.36
MSH5-215ENST00000482280 SDSP20132 328 aa23.55■■□□□ 1.36
MSH5-215ENST00000482280 CCND3P30281 292 aaPredicted RBP23.55■■□□□ 1.36
MSH5-215ENST00000482280 SLC4A3P48751 1232 aa23.55■■□□□ 1.36
MSH5-215ENST00000482280 RRP12Q5JTH9 1297 aaKnown RBP23.55■■□□□ 1.36
MSH5-215ENST00000482280 OLFML2BQ68BL8 750 aa23.55■■□□□ 1.36
MSH5-215ENST00000482280 C11orf49Q9H6J7 331 aa23.55■■□□□ 1.36
MSH5-215ENST00000482280 OGDHLQ9ULD0 1010 aa23.55■■□□□ 1.36
MSH5-215ENST00000482280 A0A0G2JMZ2 1700 aa23.54■■□□□ 1.36
MSH5-215ENST00000482280 FGAP02671 866 aa23.54■■□□□ 1.36
MSH5-215ENST00000482280 HSPD1P10809 573 aaKnown RBP23.54■■□□□ 1.36
MSH5-215ENST00000482280 BMP3P12645 472 aa23.54■■□□□ 1.36
MSH5-215ENST00000482280 CYP2C19P33261 490 aa23.54■■□□□ 1.36
MSH5-215ENST00000482280 IRX6P78412 446 aaPredicted RBP23.54■■□□□ 1.36
MSH5-215ENST00000482280 SNRNP48Q6IEG0 339 aaKnown RBP23.54■■□□□ 1.36
MSH5-215ENST00000482280 FLRT1Q9NZU1 646 aa23.54■■□□□ 1.36
MSH5-215ENST00000482280 SLC1A4P43007 532 aa23.53■■□□□ 1.36
MSH5-215ENST00000482280 CWC27Q6UX04 472 aaKnown RBP23.53■■□□□ 1.36
MSH5-215ENST00000482280 CPXCR1Q8N123 301 aa23.53■■□□□ 1.36
MSH5-215ENST00000482280 CHURC1Q8WUH1 139 aa23.53■■□□□ 1.36
MSH5-215ENST00000482280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.53■■□□□ 1.36
MSH5-215ENST00000482280 GREB1LQ9C091 1923 aaPredicted RBP23.53■■□□□ 1.36
MSH5-215ENST00000482280 FOXP2O15409 715 aa23.52■■□□□ 1.36
MSH5-215ENST00000482280 ORC4O43929 436 aa23.52■■□□□ 1.36
MSH5-215ENST00000482280 FDX1P10109 184 aa23.52■■□□□ 1.36
MSH5-215ENST00000482280 STAT2P52630 851 aa23.52■■□□□ 1.36
MSH5-215ENST00000482280 DIS3LQ8TF46 1054 aaKnown RBP23.52■■□□□ 1.36
MSH5-215ENST00000482280 DDX11Q96FC9 970 aa23.52■■□□□ 1.36
MSH5-215ENST00000482280 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
MSH5-215ENST00000482280 DDX20Q9UHI6 824 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms