RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 COL11A1P12107 1806 aaPredicted RBP17.56■□□□□ 0.4
OPTN-210ENST00000482140 NDUFB10O96000 172 aa17.55■□□□□ 0.4
OPTN-210ENST00000482140 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
OPTN-210ENST00000482140 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
OPTN-210ENST00000482140 MKL1Q969V6 931 aa17.55■□□□□ 0.4
OPTN-210ENST00000482140 NUP88Q99567 741 aaPredicted RBP17.55■□□□□ 0.4
OPTN-210ENST00000482140 UNC93B1Q9H1C4 597 aa17.55■□□□□ 0.4
OPTN-210ENST00000482140 INCENPQ9NQS7 918 aa17.55■□□□□ 0.4
OPTN-210ENST00000482140 FBXO28Q9NVF7 368 aa17.55■□□□□ 0.4
OPTN-210ENST00000482140 PPP1R9AQ9ULJ8 1098 aa17.55■□□□□ 0.4
OPTN-210ENST00000482140 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
OPTN-210ENST00000482140 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
OPTN-210ENST00000482140 SLC15A5A6NIM6 579 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 ORC4O43929 436 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 GJB1P08034 283 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 XRCC5P13010 732 aaKnown RBP17.54■□□□□ 0.4
OPTN-210ENST00000482140 GSPT1P15170 499 aaKnown RBP17.54■□□□□ 0.4
OPTN-210ENST00000482140 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
OPTN-210ENST00000482140 PTPREP23469 700 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 HAND2P61296 217 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 MORN1Q5T089 497 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 APBA2Q99767 749 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 MOV10L1Q9BXT6 1211 aaKnown RBP17.54■□□□□ 0.4
OPTN-210ENST00000482140 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
OPTN-210ENST00000482140 CTDP1Q9Y5B0 961 aaPredicted RBP17.54■□□□□ 0.4
OPTN-210ENST00000482140 MAP2K5Q13163 448 aa17.53■□□□□ 0.4
OPTN-210ENST00000482140 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
OPTN-210ENST00000482140 NCAPG2Q86XI2 1143 aa17.53■□□□□ 0.4
OPTN-210ENST00000482140 GMCL1P1Q8NEA9 526 aa17.53■□□□□ 0.4
OPTN-210ENST00000482140 SHCBP1Q8NEM2 672 aa17.53■□□□□ 0.4
OPTN-210ENST00000482140 TRIB2Q92519 343 aa17.53■□□□□ 0.4
OPTN-210ENST00000482140 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
OPTN-210ENST00000482140 LAMA4Q16363 1823 aa17.53■□□□□ 0.4
OPTN-210ENST00000482140 PDE4DIPQ5VU43 2346 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 ZNF213O14771 459 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 PCP11498 1178 aaKnown RBP17.52■□□□□ 0.4
OPTN-210ENST00000482140 ERCC3P19447 782 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 GJA8P48165 433 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 SLFN13Q68D06 897 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 U2AF1L4Q8WU68 220 aaKnown RBP17.52■□□□□ 0.4
OPTN-210ENST00000482140 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 USP6NLQ92738 828 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 MROH8Q9H579 483 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 TACC3Q9Y6A5 838 aa17.52■□□□□ 0.4
OPTN-210ENST00000482140 VWA5AO00534 786 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 STRNO43815 780 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 SLC25A27O95847 323 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 FGRP09769 529 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 GRB14Q14449 540 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 TMEM132BQ14DG7 1078 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 PRPF38AQ8NAV1 312 aaKnown RBP17.51■□□□□ 0.39
OPTN-210ENST00000482140 STAG1Q8WVM7 1258 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 DSCC1Q9BVC3 393 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.51■□□□□ 0.39
OPTN-210ENST00000482140 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
OPTN-210ENST00000482140 FEM1BQ9UK73 627 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 ADAMTS5Q9UNA0 930 aa17.51■□□□□ 0.39
OPTN-210ENST00000482140 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 RAD50Q92878 1312 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 NMT2O60551 498 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 SGPL1O95470 568 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 BMP3P12645 472 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 COPB2P35606 906 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 SLC1A4P43007 532 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 TRIM32Q13049 653 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
OPTN-210ENST00000482140 CCL14Q16627 93 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
OPTN-210ENST00000482140 DPP9Q86TI2 863 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 KIFC2Q96AC6 838 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 DEFB118Q96PH6 123 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 IL17RBQ9NRM6 502 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 CTNNA3Q9UI47 895 aa17.5■□□□□ 0.39
OPTN-210ENST00000482140 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 ZNFX1Q9P2E3 1918 aaKnown RBP17.49■□□□□ 0.39
OPTN-210ENST00000482140 ZBED4O75132 1171 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 TFRCP02786 760 aaKnown RBP17.49■□□□□ 0.39
OPTN-210ENST00000482140 PRKAR2AP13861 404 aaKnown RBP17.49■□□□□ 0.39
OPTN-210ENST00000482140 CAPN2P17655 700 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 ADORA2AP29274 412 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 STAT3P40763 770 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
OPTN-210ENST00000482140 MFSD14CQ5VZR4 134 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 RIOX2Q8IUF8 465 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 TBC1D10CQ8IV04 446 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 ESR2Q92731 530 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 CHMP4CQ96CF2 233 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 PAK6Q9NQU5 681 aaPredicted RBP17.49■□□□□ 0.39
OPTN-210ENST00000482140 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
OPTN-210ENST00000482140 TMEM232C9JQI7 657 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 FCER1AP12319 257 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 MCCP23508 829 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 CHMLP26374 656 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 STAT2P52630 851 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 GMCL1Q96IK5 515 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 TEX13BQ9BXU2 312 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms