RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 ANKRD23Q86SG2 305 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 BRI3BPQ8WY22 251 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 USP17L15C9J2P7 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L13C9JLJ4 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L11C9JVI0 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L18D6R9N7 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L22D6RA61 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L17D6RBQ6 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L19D6RCP7 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L20D6RJB6 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 ZNF543Q08ER8 600 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 USP17L24Q0WX57 530 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 GRM4Q14833 912 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 GPAT2Q6NUI2 795 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 SPICE1Q8N0Z3 855 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 LIMCH1Q9UPQ0 1083 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 THSD7BQ9C0I4 1608 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 PARP14Q460N5 1801 aa24.19■■□□□ 1.46
VPS16-207ENST00000481812 RAD21O60216 631 aa24.18■■□□□ 1.46
VPS16-207ENST00000481812 PARP1P09874 1014 aaKnown RBP24.18■■□□□ 1.46
VPS16-207ENST00000481812 PDIA3P30101 505 aaKnown RBP24.18■■□□□ 1.46
VPS16-207ENST00000481812 KIF5BP33176 963 aa24.18■■□□□ 1.46
VPS16-207ENST00000481812 VEGFBP49765 207 aa24.18■■□□□ 1.46
VPS16-207ENST00000481812 HTRA3P83110 453 aa24.18■■□□□ 1.46
VPS16-207ENST00000481812 KIF23Q02241 960 aaPredicted RBP24.18■■□□□ 1.46
VPS16-207ENST00000481812 DGKZQ13574 1117 aa24.18■■□□□ 1.46
VPS16-207ENST00000481812 CATSPERGQ6ZRH7 1159 aa24.18■■□□□ 1.46
VPS16-207ENST00000481812 FANCBQ8NB91 859 aa24.18■■□□□ 1.46
VPS16-207ENST00000481812 ZSCAN31Q96LW9 406 aaPredicted RBP24.18■■□□□ 1.46
VPS16-207ENST00000481812 PALM3A6NDB9 673 aaPredicted RBP24.17■■□□□ 1.46
VPS16-207ENST00000481812 GNAQP50148 359 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 FAM83BQ5T0W9 1011 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 BTNL9Q6UXG8 535 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 CTCFLQ8NI51 663 aaPredicted RBP24.17■■□□□ 1.46
VPS16-207ENST00000481812 CHURC1Q8WUH1 139 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 NUP133Q8WUM0 1156 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 RPAP3Q9H6T3 665 aaPredicted RBP24.17■■□□□ 1.46
VPS16-207ENST00000481812 RBM28Q9NW13 759 aaKnown RBP24.17■■□□□ 1.46
VPS16-207ENST00000481812 MAD2L2Q9UI95 211 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 FEM1BQ9UK73 627 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 TPCN1Q9ULQ1 816 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 HPS5Q9UPZ3 1129 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 RLFQ13129 1914 aa24.17■■□□□ 1.46
VPS16-207ENST00000481812 MYPNQ86TC9 1320 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 GOLGA8BA8MQT2 603 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 BTBD19C9JJ37 291 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 SMARCA1P28370 1054 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 TREML2Q5T2D2 321 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 OTUD7BQ6GQQ9 843 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 FAM160B2Q86V87 743 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 MICU3Q86XE3 530 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 SNX21Q969T3 373 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 PTPN18Q99952 460 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 MYL10Q9BUA6 226 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 MTMR7Q9Y216 660 aa24.16■■□□□ 1.46
VPS16-207ENST00000481812 CCDC196A0A1B0GTZ2 297 aa24.15■■□□□ 1.46
VPS16-207ENST00000481812 METAP2P50579 478 aaKnown RBP eCLIP24.15■■□□□ 1.46
VPS16-207ENST00000481812 CCDC96Q2M329 555 aa24.15■■□□□ 1.46
VPS16-207ENST00000481812 NUP88Q99567 741 aaPredicted RBP24.15■■□□□ 1.46
VPS16-207ENST00000481812 LZTS2Q9BRK4 669 aa24.15■■□□□ 1.46
VPS16-207ENST00000481812 SH2B1Q9NRF2 756 aaPredicted RBP24.15■■□□□ 1.46
VPS16-207ENST00000481812 GOLGA8AA7E2F4 631 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 TMEM232C9JQI7 657 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 PFKFB2O60825 505 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 AOC2O75106 756 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 STAT2P52630 851 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 GRM1Q13255 1194 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 RTN1Q16799 776 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 KCTD1Q719H9 257 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 RASGRP2Q7LDG7 609 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 IFNL1Q8IU54 200 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 CHMP4CQ96CF2 233 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 ZIC5Q96T25 663 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 HOXC10Q9NYD6 342 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 PNMA3Q9UL41 463 aa24.14■■□□□ 1.45
VPS16-207ENST00000481812 NAP1L2Q9ULW6 460 aaPredicted RBP24.14■■□□□ 1.45
VPS16-207ENST00000481812 KLRF2D3W0D1 207 aa24.13■■□□□ 1.45
VPS16-207ENST00000481812 FDX1P10109 184 aa24.13■■□□□ 1.45
VPS16-207ENST00000481812 OSBPP22059 807 aa24.13■■□□□ 1.45
VPS16-207ENST00000481812 COG2Q14746 738 aa24.13■■□□□ 1.45
VPS16-207ENST00000481812 ME3Q16798 604 aa24.13■■□□□ 1.45
VPS16-207ENST00000481812 STAG2Q8N3U4 1231 aa24.13■■□□□ 1.45
VPS16-207ENST00000481812 PRPF38AQ8NAV1 312 aaKnown RBP24.13■■□□□ 1.45
VPS16-207ENST00000481812 LARP6Q9BRS8 491 aaKnown RBP24.13■■□□□ 1.45
VPS16-207ENST00000481812 TANGO6Q9C0B7 1094 aa24.13■■□□□ 1.45
VPS16-207ENST00000481812 SLKQ9H2G2 1235 aaPredicted RBP24.13■■□□□ 1.45
VPS16-207ENST00000481812 FAM217BQ9NTX9 383 aaPredicted RBP24.13■■□□□ 1.45
VPS16-207ENST00000481812 PDHXO00330 501 aa24.12■■□□□ 1.45
VPS16-207ENST00000481812 IGF2BP3O00425 579 aaKnown RBP eCLIP24.12■■□□□ 1.45
VPS16-207ENST00000481812 CD2BP2O95400 341 aaKnown RBP24.12■■□□□ 1.45
VPS16-207ENST00000481812 ALDH1A1P00352 501 aa24.12■■□□□ 1.45
VPS16-207ENST00000481812 RXRAP19793 462 aa24.12■■□□□ 1.45
VPS16-207ENST00000481812 LBX2Q6XYB7 198 aa24.12■■□□□ 1.45
VPS16-207ENST00000481812 FAM43AQ8N2R8 423 aa24.12■■□□□ 1.45
VPS16-207ENST00000481812 SLF1Q9BQI6 1058 aa24.12■■□□□ 1.45
VPS16-207ENST00000481812 ASCC2Q9H1I8 757 aaPredicted RBP24.12■■□□□ 1.45
VPS16-207ENST00000481812 GPCPD1Q9NPB8 672 aa24.12■■□□□ 1.45
VPS16-207ENST00000481812 FRMPD2Q68DX3 1309 aaPredicted RBP24.11■■□□□ 1.45
VPS16-207ENST00000481812 FLOT1O75955 427 aa24.11■■□□□ 1.45
VPS16-207ENST00000481812 GOLGA8HP0CJ92 632 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms