RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 GPR160Q9UJ42 338 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 IRAK3Q9Y616 596 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 KIF13AQ9H1H9 1805 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 SPATA31D1Q6ZQQ2 1576 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 SDHBP21912 280 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 ST13P50502 369 aaKnown RBP3.85□□□□□ -1.79
USH2A-204ENST00000481786 SRSF3P84103 164 aaKnown RBP3.85□□□□□ -1.79
USH2A-204ENST00000481786 EGR3Q06889 387 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 TAF1CQ15572 869 aaPredicted RBP3.85□□□□□ -1.79
USH2A-204ENST00000481786 PRAMEF13Q5VWM6 474 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.85□□□□□ -1.79
USH2A-204ENST00000481786 AGMOQ6ZNB7 445 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 HOMEZQ8IX15 550 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 LILRA2Q8N149 483 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 TP53I13Q8NBR0 393 aaPredicted RBP3.85□□□□□ -1.79
USH2A-204ENST00000481786 KCT2Q8NC54 265 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 SLC16A11Q8NCK7 471 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 ELMO3Q96BJ8 720 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 GPR20Q99678 358 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 CNTD2Q9H8S5 307 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 CWC22Q9HCG8 908 aaKnown RBP3.85□□□□□ -1.79
USH2A-204ENST00000481786 MYRFQ9Y2G1 1151 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 USP31Q70CQ4 1352 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 SNAPC4Q5SXM2 1469 aa3.85□□□□□ -1.79
USH2A-204ENST00000481786 MAGI1Q96QZ7 1491 aaPredicted RBP3.85□□□□□ -1.79
USH2A-204ENST00000481786 ZBTB7CA1YPR0 619 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 NOTOA8MTQ0 251 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 SORBS3O60504 671 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 FSHBP01225 129 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 TNFRSF1AP19438 455 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 LIG3P49916 1009 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 MAP3K11Q16584 847 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 MFSD2AQ8NA29 543 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 NOC4LQ9BVI4 516 aaKnown RBP3.84□□□□□ -1.79
USH2A-204ENST00000481786 BCL2L13Q9BXK5 485 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 PCDHB5Q9Y5E4 795 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 PCDHA11Q9Y5I1 949 aa3.84□□□□□ -1.79
USH2A-204ENST00000481786 TARBP1Q13395 1621 aaKnown RBP3.84□□□□□ -1.8
USH2A-204ENST00000481786 ZC3H12DA2A288 527 aaKnown RBP3.83□□□□□ -1.8
USH2A-204ENST00000481786 FITM1A5D6W6 292 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 RLBP1P12271 317 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 TFE3P19532 575 aaPredicted RBP3.83□□□□□ -1.8
USH2A-204ENST00000481786 CDR1P51861 262 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 SEPT6Q14141 434 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 NR0B2Q15466 257 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 ADGRF1Q5T601 910 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 TMCO4Q5TGY1 634 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 ERICH6BQ5W0A0 696 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 HDXQ7Z353 690 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 OXR1Q8N573 874 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 PHC3Q8NDX5 983 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 PLPPR2Q96GM1 343 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 DPH2Q9BQC3 489 aaPredicted RBP3.83□□□□□ -1.8
USH2A-204ENST00000481786 MRS2Q9HD23 443 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 VTI1BQ9UEU0 232 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 DUSP13Q9UII6 198 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 SNCAIPQ9Y6H5 919 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 MAPKBP1O60336 1514 aa3.83□□□□□ -1.8
USH2A-204ENST00000481786 DIP2BQ9P265 1576 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 TDRD9Q8NDG6 1382 aaKnown RBP3.82□□□□□ -1.8
USH2A-204ENST00000481786 GFRA2O00451 464 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 MATN3O15232 486 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 VIPR1P32241 457 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 KIR3DL1P43629 444 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 WIPI1Q5MNZ9 446 aaPredicted RBP3.82□□□□□ -1.8
USH2A-204ENST00000481786 CNKSR3Q6P9H4 555 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 FRMD5Q7Z6J6 570 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 FAM129CQ86XR2 697 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 SP8Q8IXZ3 490 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 GIPC2Q8TF65 315 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 WNT10AQ9GZT5 417 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 SCAND2PQ9GZW5 306 aaPredicted RBP3.82□□□□□ -1.8
USH2A-204ENST00000481786 TLR6Q9Y2C9 796 aa3.82□□□□□ -1.8
USH2A-204ENST00000481786 WDR97A6NE52 1622 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 TOP2BQ02880 1626 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 OR14I1A6ND48 311 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 IRS4O14654 1257 aaPredicted RBP3.81□□□□□ -1.8
USH2A-204ENST00000481786 N4BP3O15049 544 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 GRIN3BO60391 1043 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 CILPO75339 1184 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 CST3P01034 146 aaPredicted RBP3.81□□□□□ -1.8
USH2A-204ENST00000481786 LMNB1P20700 586 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 ITGAEP38570 1179 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 CAP2P40123 477 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 ETF1P62495 437 aaKnown RBP3.81□□□□□ -1.8
USH2A-204ENST00000481786 MRPL58Q14197 206 aaKnown RBP3.81□□□□□ -1.8
USH2A-204ENST00000481786 ZNF326Q5BKZ1 582 aaKnown RBP3.81□□□□□ -1.8
USH2A-204ENST00000481786 FERMT3Q86UX7 667 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 PIWIL2Q8TC59 973 aaKnown RBP3.81□□□□□ -1.8
USH2A-204ENST00000481786 PPP1R13LQ8WUF5 828 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 VWCEQ96DN2 955 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 RSRP1Q9BUV0 290 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 MIR1-1HGQ9H1L0 117 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 LUC7LQ9NQ29 371 aaKnown RBP3.81□□□□□ -1.8
USH2A-204ENST00000481786 SIRT5Q9NXA8 310 aa3.81□□□□□ -1.8
USH2A-204ENST00000481786 DNMBPQ6XZF7 1577 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 GRIN2BQ13224 1484 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 F6X3S4 739 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 LRRN2O75325 713 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 ZNF16P17020 682 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms